Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm18206-201ENSMUST00000207027 926 ntBASIC21.72■■□□□ 1.07
Hoxc9P09633 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC21.72■■□□□ 1.07
Hoxc9P09633 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Hoxc9P09633 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxc9P09633 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxc9P09633 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxc9P09633 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Hoxc9P09633 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxc9P09633 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxc9P09633 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxc9P09633 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Hoxc9P09633 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Hoxc9P09633 Mir5131-201ENSMUST00000175426 93 ntBASIC21.71■■□□□ 1.07
Hoxc9P09633 Gm5712-201ENSMUST00000199748 1043 ntBASIC21.71■■□□□ 1.07
Hoxc9P09633 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hoxc9P09633 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Hoxc9P09633 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC21.71■■□□□ 1.07
Hoxc9P09633 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hoxc9P09633 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hoxc9P09633 Slc35b2-202ENSMUST00000223987 1766 ntBASIC21.71■■□□□ 1.07
Hoxc9P09633 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC21.71■■□□□ 1.07
Hoxc9P09633 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Hoxc9P09633 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Hoxc9P09633 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxc9P09633 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Hoxc9P09633 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxc9P09633 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.7■■□□□ 1.06
Hoxc9P09633 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxc9P09633 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxc9P09633 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC21.7■■□□□ 1.06
Hoxc9P09633 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxc9P09633 AC138767.1-201ENSMUST00000222661 415 ntBASIC21.7■■□□□ 1.06
Hoxc9P09633 AC107711.5-202ENSMUST00000226429 702 ntBASIC21.7■■□□□ 1.06
Hoxc9P09633 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxc9P09633 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxc9P09633 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxc9P09633 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxc9P09633 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Hoxc9P09633 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxc9P09633 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc9P09633 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc9P09633 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc9P09633 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc9P09633 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc9P09633 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc9P09633 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc9P09633 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc9P09633 Gm5867-201ENSMUST00000063197 592 ntBASIC21.69■■□□□ 1.06
Hoxc9P09633 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc9P09633 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc9P09633 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc9P09633 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc9P09633 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc9P09633 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc9P09633 Gm9889-202ENSMUST00000206983 1577 ntBASIC21.69■■□□□ 1.06
Hoxc9P09633 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC21.69■■□□□ 1.06
Hoxc9P09633 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc9P09633 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc9P09633 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc9P09633 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc9P09633 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC21.68■■□□□ 1.06
Hoxc9P09633 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc9P09633 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc9P09633 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc9P09633 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc9P09633 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc9P09633 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc9P09633 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc9P09633 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc9P09633 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc9P09633 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc9P09633 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc9P09633 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc9P09633 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc9P09633 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc9P09633 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Hoxc9P09633 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hoxc9P09633 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Hoxc9P09633 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Hoxc9P09633 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Hoxc9P09633 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hoxc9P09633 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hoxc9P09633 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.67■■□□□ 1.06
Hoxc9P09633 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hoxc9P09633 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hoxc9P09633 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hoxc9P09633 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC21.67■■□□□ 1.06
Hoxc9P09633 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Hoxc9P09633 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC21.67■■□□□ 1.06
Hoxc9P09633 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC21.67■■□□□ 1.06
Hoxc9P09633 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hoxc9P09633 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hoxc9P09633 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hoxc9P09633 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hoxc9P09633 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hoxc9P09633 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxc9P09633 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxc9P09633 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxc9P09633 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxc9P09633 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms