Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.83■□□□□ 0.28
Hoxa9P09631 Gm34391-201ENSMUST00000203706 907 ntBASIC16.83■□□□□ 0.28
Hoxa9P09631 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.83■□□□□ 0.28
Hoxa9P09631 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.83■□□□□ 0.28
Hoxa9P09631 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.83■□□□□ 0.28
Hoxa9P09631 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxa9P09631 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxa9P09631 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxa9P09631 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.83■□□□□ 0.28
Hoxa9P09631 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxa9P09631 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxa9P09631 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxa9P09631 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxa9P09631 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.83■□□□□ 0.28
Hoxa9P09631 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.82■□□□□ 0.28
Hoxa9P09631 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Hoxa9P09631 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa9P09631 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa9P09631 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.82■□□□□ 0.28
Hoxa9P09631 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Hoxa9P09631 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa9P09631 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.82■□□□□ 0.28
Hoxa9P09631 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa9P09631 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa9P09631 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa9P09631 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa9P09631 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa9P09631 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa9P09631 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa9P09631 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa9P09631 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Hoxa9P09631 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxa9P09631 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa9P09631 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa9P09631 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa9P09631 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa9P09631 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa9P09631 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa9P09631 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa9P09631 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa9P09631 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hoxa9P09631 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hoxa9P09631 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.81■□□□□ 0.28
Hoxa9P09631 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Hoxa9P09631 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa9P09631 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Hoxa9P09631 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa9P09631 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Hoxa9P09631 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa9P09631 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hoxa9P09631 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa9P09631 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa9P09631 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa9P09631 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa9P09631 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Hoxa9P09631 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.81■□□□□ 0.28
Hoxa9P09631 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa9P09631 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxa9P09631 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa9P09631 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa9P09631 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Hoxa9P09631 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Hoxa9P09631 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa9P09631 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa9P09631 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hoxa9P09631 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa9P09631 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa9P09631 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa9P09631 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa9P09631 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa9P09631 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hoxa9P09631 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.8■□□□□ 0.28
Hoxa9P09631 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa9P09631 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa9P09631 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
Hoxa9P09631 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.8■□□□□ 0.28
Hoxa9P09631 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.8■□□□□ 0.28
Hoxa9P09631 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.8■□□□□ 0.28
Hoxa9P09631 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Hoxa9P09631 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa9P09631 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa9P09631 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.8■□□□□ 0.28
Hoxa9P09631 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Hoxa9P09631 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa9P09631 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa9P09631 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hoxa9P09631 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa9P09631 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa9P09631 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxa9P09631 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxa9P09631 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxa9P09631 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxa9P09631 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxa9P09631 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxa9P09631 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxa9P09631 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxa9P09631 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxa9P09631 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Hoxa9P09631 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.79■□□□□ 0.28
Hoxa9P09631 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms