Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col3a1P08121 Gm44454-201ENSMUST00000198541 138 ntBASIC19.97■□□□□ 0.79
Col3a1P08121 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Col3a1P08121 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col3a1P08121 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col3a1P08121 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col3a1P08121 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col3a1P08121 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col3a1P08121 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col3a1P08121 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col3a1P08121 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.96■□□□□ 0.79
Col3a1P08121 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.96■□□□□ 0.79
Col3a1P08121 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col3a1P08121 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col3a1P08121 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Col3a1P08121 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col3a1P08121 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col3a1P08121 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col3a1P08121 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col3a1P08121 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col3a1P08121 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Col3a1P08121 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col3a1P08121 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Col3a1P08121 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col3a1P08121 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col3a1P08121 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Col3a1P08121 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col3a1P08121 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col3a1P08121 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col3a1P08121 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col3a1P08121 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.94■□□□□ 0.78
Col3a1P08121 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col3a1P08121 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col3a1P08121 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.94■□□□□ 0.78
Col3a1P08121 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col3a1P08121 Gm27867-201ENSMUST00000184778 125 ntBASIC19.94■□□□□ 0.78
Col3a1P08121 Gm44357-201ENSMUST00000195897 142 ntBASIC19.94■□□□□ 0.78
Col3a1P08121 Gm19658-201ENSMUST00000196231 138 ntBASIC19.94■□□□□ 0.78
Col3a1P08121 Gm44367-201ENSMUST00000196836 138 ntBASIC19.94■□□□□ 0.78
Col3a1P08121 Gm44350-201ENSMUST00000197197 138 ntBASIC19.94■□□□□ 0.78
Col3a1P08121 Gm44390-201ENSMUST00000197533 144 ntBASIC19.94■□□□□ 0.78
Col3a1P08121 Gm44313-201ENSMUST00000198018 138 ntBASIC19.94■□□□□ 0.78
Col3a1P08121 Gm44486-201ENSMUST00000198508 138 ntBASIC19.94■□□□□ 0.78
Col3a1P08121 Gm44314-201ENSMUST00000199263 138 ntBASIC19.94■□□□□ 0.78
Col3a1P08121 Gm44394-201ENSMUST00000199558 138 ntBASIC19.94■□□□□ 0.78
Col3a1P08121 Gm44484-201ENSMUST00000199873 138 ntBASIC19.94■□□□□ 0.78
Col3a1P08121 Gm44466-201ENSMUST00000200264 138 ntBASIC19.94■□□□□ 0.78
Col3a1P08121 Gm44359-201ENSMUST00000200671 138 ntBASIC19.94■□□□□ 0.78
Col3a1P08121 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.94■□□□□ 0.78
Col3a1P08121 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col3a1P08121 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col3a1P08121 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col3a1P08121 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col3a1P08121 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col3a1P08121 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col3a1P08121 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col3a1P08121 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col3a1P08121 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col3a1P08121 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Col3a1P08121 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.93■□□□□ 0.78
Col3a1P08121 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Col3a1P08121 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col3a1P08121 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col3a1P08121 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.93■□□□□ 0.78
Col3a1P08121 Gm36967-201ENSMUST00000193814 266 ntBASIC19.93■□□□□ 0.78
Col3a1P08121 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col3a1P08121 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.93■□□□□ 0.78
Col3a1P08121 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Col3a1P08121 Rps4l-201ENSMUST00000071745 943 ntBASIC19.93■□□□□ 0.78
Col3a1P08121 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.93■□□□□ 0.78
Col3a1P08121 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col3a1P08121 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col3a1P08121 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Col3a1P08121 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col3a1P08121 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col3a1P08121 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col3a1P08121 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col3a1P08121 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col3a1P08121 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.93■□□□□ 0.78
Col3a1P08121 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Col3a1P08121 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Col3a1P08121 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col3a1P08121 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col3a1P08121 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col3a1P08121 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.92■□□□□ 0.78
Col3a1P08121 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col3a1P08121 Gm5864-201ENSMUST00000202263 970 ntBASIC19.92■□□□□ 0.78
Col3a1P08121 Gm6443-201ENSMUST00000203599 874 ntBASIC19.92■□□□□ 0.78
Col3a1P08121 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col3a1P08121 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Col3a1P08121 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col3a1P08121 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col3a1P08121 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Col3a1P08121 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col3a1P08121 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.92■□□□□ 0.78
Col3a1P08121 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col3a1P08121 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Col3a1P08121 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.92■□□□□ 0.78
Col3a1P08121 Gm25925-201ENSMUST00000158314 306 ntBASIC19.92■□□□□ 0.78
Col3a1P08121 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms