Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.07□□□□□ -0.16
Hoxa3P02831 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa3P02831 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa3P02831 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa3P02831 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa3P02831 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa3P02831 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa3P02831 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa3P02831 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.07□□□□□ -0.16
Hoxa3P02831 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa3P02831 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa3P02831 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hoxa3P02831 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa3P02831 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa3P02831 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa3P02831 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa3P02831 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa3P02831 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.07□□□□□ -0.16
Hoxa3P02831 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.07□□□□□ -0.16
Hoxa3P02831 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa3P02831 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa3P02831 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa3P02831 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa3P02831 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa3P02831 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa3P02831 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa3P02831 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Hoxa3P02831 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.06□□□□□ -0.16
Hoxa3P02831 Gm33142-201ENSMUST00000193913 867 ntBASIC14.06□□□□□ -0.16
Hoxa3P02831 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxa3P02831 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa3P02831 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa3P02831 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa3P02831 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa3P02831 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa3P02831 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa3P02831 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa3P02831 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Hoxa3P02831 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa3P02831 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa3P02831 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hoxa3P02831 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa3P02831 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa3P02831 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa3P02831 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.05□□□□□ -0.16
Hoxa3P02831 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxa3P02831 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa3P02831 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa3P02831 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.05□□□□□ -0.16
Hoxa3P02831 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa3P02831 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa3P02831 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa3P02831 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa3P02831 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa3P02831 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa3P02831 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxa3P02831 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.05□□□□□ -0.16
Hoxa3P02831 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa3P02831 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa3P02831 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa3P02831 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa3P02831 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxa3P02831 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hoxa3P02831 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Hoxa3P02831 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.04□□□□□ -0.16
Hoxa3P02831 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Gm27389-201ENSMUST00000183622 195 ntBASIC14.04□□□□□ -0.16
Hoxa3P02831 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Hoxa3P02831 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hoxa3P02831 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxa3P02831 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxa3P02831 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Hoxa3P02831 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa3P02831 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa3P02831 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa3P02831 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hoxa3P02831 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa3P02831 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hoxa3P02831 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa3P02831 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa3P02831 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms