Protein–RNA interactions for Protein: P01867

Igh-3, Ig gamma-2B chain C region, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-3P01867 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igh-3P01867 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igh-3P01867 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Igh-3P01867 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igh-3P01867 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igh-3P01867 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igh-3P01867 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igh-3P01867 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igh-3P01867 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Igh-3P01867 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Igh-3P01867 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Igh-3P01867 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Igh-3P01867 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Igh-3P01867 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.63□□□□□ -0.07
Igh-3P01867 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Igh-3P01867 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Igh-3P01867 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Igh-3P01867 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.63□□□□□ -0.07
Igh-3P01867 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Igh-3P01867 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igh-3P01867 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igh-3P01867 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.62□□□□□ -0.07
Igh-3P01867 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.62□□□□□ -0.07
Igh-3P01867 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igh-3P01867 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igh-3P01867 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Igh-3P01867 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Igh-3P01867 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Igh-3P01867 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igh-3P01867 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igh-3P01867 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Igh-3P01867 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Igh-3P01867 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Igh-3P01867 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igh-3P01867 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igh-3P01867 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Igh-3P01867 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.62□□□□□ -0.07
Igh-3P01867 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igh-3P01867 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igh-3P01867 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igh-3P01867 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igh-3P01867 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igh-3P01867 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Igh-3P01867 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Igh-3P01867 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igh-3P01867 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Igh-3P01867 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.61□□□□□ -0.07
Igh-3P01867 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.61□□□□□ -0.07
Igh-3P01867 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 Gm23634-201ENSMUST00000175071 91 ntBASIC14.61□□□□□ -0.07
Igh-3P01867 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.61□□□□□ -0.07
Igh-3P01867 Gm27389-201ENSMUST00000183622 195 ntBASIC14.61□□□□□ -0.07
Igh-3P01867 Gm44450-201ENSMUST00000199528 114 ntBASIC14.61□□□□□ -0.07
Igh-3P01867 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.61□□□□□ -0.07
Igh-3P01867 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Igh-3P01867 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.61□□□□□ -0.07
Igh-3P01867 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Igh-3P01867 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.61□□□□□ -0.07
Igh-3P01867 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igh-3P01867 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Igh-3P01867 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Igh-3P01867 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Igh-3P01867 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms