Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01852 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01852 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01852 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01852 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
P01852 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01852 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01852 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01852 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01852 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.32■□□□□ 0.04
P01852 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01852 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P01852 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01852 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01852 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
P01852 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P01852 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.32■□□□□ 0.04
P01852 Gm10013-201ENSMUST00000106074 672 ntBASIC15.32■□□□□ 0.04
P01852 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P01852 Mir1668-201ENSMUST00000184114 107 ntBASIC15.32■□□□□ 0.04
P01852 Gm18101-201ENSMUST00000215769 548 ntBASIC15.32■□□□□ 0.04
P01852 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01852 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
P01852 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01852 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P01852 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
P01852 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01852 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P01852 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01852 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01852 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.32■□□□□ 0.04
P01852 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
P01852 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
P01852 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
P01852 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
P01852 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
P01852 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
P01852 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.31■□□□□ 0.04
P01852 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
P01852 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01852 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
P01852 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01852 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01852 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
P01852 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
P01852 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01852 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P01852 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01852 Gm27000-201ENSMUST00000182943 842 ntBASIC15.3■□□□□ 0.04
P01852 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01852 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.3■□□□□ 0.04
P01852 Gm7213-201ENSMUST00000215977 950 ntBASIC15.3■□□□□ 0.04
P01852 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01852 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P01852 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
P01852 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
P01852 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01852 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01852 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
P01852 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01852 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01852 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01852 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.29■□□□□ 0.04
P01852 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
P01852 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01852 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.29■□□□□ 0.04
P01852 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.29■□□□□ 0.04
P01852 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01852 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01852 Gm22697-201ENSMUST00000175194 63 ntBASIC15.29■□□□□ 0.04
P01852 Gm7977-201ENSMUST00000193787 748 ntBASIC15.29■□□□□ 0.04
P01852 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01852 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01852 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01852 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
P01852 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01852 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
P01852 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01852 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01852 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms