Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TcraP01849 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TcraP01849 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TcraP01849 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TcraP01849 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TcraP01849 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.31□□□□□ -0.44
TcraP01849 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.31□□□□□ -0.44
TcraP01849 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TcraP01849 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
TcraP01849 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TcraP01849 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TcraP01849 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TcraP01849 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TcraP01849 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TcraP01849 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TcraP01849 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TcraP01849 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TcraP01849 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TcraP01849 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TcraP01849 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TcraP01849 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TcraP01849 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TcraP01849 Gm13146-201ENSMUST00000118508 780 ntBASIC12.3□□□□□ -0.44
TcraP01849 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC12.3□□□□□ -0.44
TcraP01849 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TcraP01849 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TcraP01849 Gm10493-201ENSMUST00000097270 612 ntBASIC12.3□□□□□ -0.44
TcraP01849 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TcraP01849 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TcraP01849 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TcraP01849 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TcraP01849 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TcraP01849 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TcraP01849 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.3□□□□□ -0.44
TcraP01849 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TcraP01849 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TcraP01849 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TcraP01849 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TcraP01849 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TcraP01849 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
TcraP01849 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TcraP01849 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TcraP01849 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TcraP01849 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TcraP01849 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TcraP01849 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TcraP01849 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TcraP01849 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.29□□□□□ -0.44
TcraP01849 Gm18671-201ENSMUST00000214826 683 ntBASIC12.29□□□□□ -0.44
TcraP01849 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TcraP01849 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TcraP01849 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TcraP01849 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TcraP01849 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TcraP01849 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TcraP01849 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TcraP01849 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TcraP01849 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TcraP01849 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TcraP01849 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
TcraP01849 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
TcraP01849 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TcraP01849 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TcraP01849 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TcraP01849 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TcraP01849 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TcraP01849 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TcraP01849 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
TcraP01849 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TcraP01849 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.28□□□□□ -0.44
TcraP01849 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TcraP01849 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TcraP01849 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TcraP01849 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.28□□□□□ -0.44
TcraP01849 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TcraP01849 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TcraP01849 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TcraP01849 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TcraP01849 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TcraP01849 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TcraP01849 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TcraP01849 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TcraP01849 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
TcraP01849 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TcraP01849 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TcraP01849 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TcraP01849 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.27□□□□□ -0.44
TcraP01849 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TcraP01849 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TcraP01849 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
TcraP01849 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TcraP01849 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
TcraP01849 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TcraP01849 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
TcraP01849 Gm13534-201ENSMUST00000121169 513 ntBASIC12.27□□□□□ -0.45
TcraP01849 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TcraP01849 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
TcraP01849 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.27□□□□□ -0.45
TcraP01849 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TcraP01849 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms