Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P01808 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.19■□□□□ 0.02
P01808 Gm18032-201ENSMUST00000222541 538 ntBASIC15.19■□□□□ 0.02
P01808 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P01808 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P01808 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01808 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01808 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01808 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P01808 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.19■□□□□ 0.02
P01808 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01808 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01808 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P01808 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.18■□□□□ 0.02
P01808 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
P01808 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01808 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.18■□□□□ 0.02
P01808 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.18■□□□□ 0.02
P01808 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01808 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01808 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P01808 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01808 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P01808 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01808 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01808 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01808 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01808 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
P01808 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01808 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
P01808 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01808 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
P01808 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P01808 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01808 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.18■□□□□ 0.02
P01808 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01808 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01808 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01808 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P01808 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
P01808 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01808 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01808 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01808 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01808 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01808 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01808 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01808 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01808 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01808 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
P01808 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01808 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.17■□□□□ 0.02
P01808 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
P01808 Gm26039-201ENSMUST00000158152 144 ntBASIC15.17■□□□□ 0.02
P01808 Gm22697-201ENSMUST00000175194 63 ntBASIC15.17■□□□□ 0.02
P01808 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.17■□□□□ 0.02
P01808 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.17■□□□□ 0.02
P01808 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
P01808 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.17■□□□□ 0.02
P01808 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01808 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01808 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01808 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
P01808 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
P01808 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01808 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P01808 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01808 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P01808 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01808 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01808 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01808 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
P01808 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
P01808 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01808 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P01808 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
P01808 Gm18101-201ENSMUST00000215769 548 ntBASIC15.16■□□□□ 0.02
P01808 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P01808 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01808 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01808 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.16■□□□□ 0.02
P01808 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01808 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01808 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01808 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01808 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01808 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P01808 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.16■□□□□ 0.02
P01808 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P01808 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
P01808 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01808 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01808 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.15■□□□□ 0.02
P01808 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01808 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01808 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01808 Gm13216-201ENSMUST00000117145 591 ntBASIC15.15■□□□□ 0.02
P01808 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01808 Gm21559-201ENSMUST00000220638 855 ntBASIC15.15■□□□□ 0.02
P01808 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms