Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.29□□□□□ -0.28
P01788 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P01788 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.29□□□□□ -0.28
P01788 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.29□□□□□ -0.28
P01788 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P01788 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01788 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
P01788 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
P01788 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.28□□□□□ -0.28
P01788 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 Gm12933-201ENSMUST00000120203 872 ntBASIC13.28□□□□□ -0.28
P01788 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.28□□□□□ -0.28
P01788 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.28□□□□□ -0.28
P01788 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
P01788 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
P01788 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.28□□□□□ -0.28
P01788 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.28□□□□□ -0.28
P01788 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01788 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
P01788 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
P01788 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P01788 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.27□□□□□ -0.28
P01788 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P01788 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P01788 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
P01788 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
P01788 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01788 Gm13158-201ENSMUST00000122007 736 ntBASIC13.27□□□□□ -0.29
P01788 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.27□□□□□ -0.29
P01788 Gm4974-201ENSMUST00000209974 875 ntBASIC13.27□□□□□ -0.29
P01788 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01788 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01788 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01788 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01788 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01788 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01788 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01788 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01788 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01788 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
P01788 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01788 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
P01788 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01788 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
P01788 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.26□□□□□ -0.29
P01788 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
P01788 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.26□□□□□ -0.29
P01788 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
P01788 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Gm27275-201ENSMUST00000184318 272 ntBASIC13.26□□□□□ -0.29
P01788 Gm37292-201ENSMUST00000192062 758 ntBASIC13.26□□□□□ -0.29
P01788 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.26□□□□□ -0.29
P01788 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
P01788 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01788 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
P01788 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
P01788 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
P01788 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
P01788 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.25□□□□□ -0.29
P01788 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.25□□□□□ -0.29
P01788 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01788 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
P01788 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms