Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Igh-VJ558P01758 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Gm11539-201ENSMUST00000119837 557 ntBASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Gm13436-201ENSMUST00000120418 567 ntBASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.51□□□□□ -0.09
Igh-VJ558P01758 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Igh-VJ558P01758 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igh-VJ558P01758 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igh-VJ558P01758 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igh-VJ558P01758 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Phf7-203ENSMUST00000226565 1971 ntBASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Gm13559-201ENSMUST00000120476 863 ntBASIC14.48□□□□□ -0.09
Igh-VJ558P01758 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.48□□□□□ -0.09
Igh-VJ558P01758 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Gm2274-201ENSMUST00000184539 609 ntBASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igh-VJ558P01758 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Igh-VJ558P01758 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms