Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ShdO88834 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ShdO88834 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ShdO88834 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShdO88834 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ShdO88834 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShdO88834 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ShdO88834 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ShdO88834 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ShdO88834 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShdO88834 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShdO88834 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShdO88834 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShdO88834 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShdO88834 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ShdO88834 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ShdO88834 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShdO88834 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ShdO88834 Gm6433-201ENSMUST00000118634 875 ntBASIC17.13■□□□□ 0.33
ShdO88834 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
ShdO88834 Gm13836-201ENSMUST00000121159 501 ntBASIC17.13■□□□□ 0.33
ShdO88834 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ShdO88834 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShdO88834 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.13■□□□□ 0.33
ShdO88834 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ShdO88834 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShdO88834 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShdO88834 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.13■□□□□ 0.33
ShdO88834 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShdO88834 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShdO88834 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShdO88834 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShdO88834 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ShdO88834 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShdO88834 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShdO88834 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.13■□□□□ 0.33
ShdO88834 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShdO88834 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ShdO88834 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShdO88834 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShdO88834 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShdO88834 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShdO88834 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShdO88834 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ShdO88834 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ShdO88834 Gm2274-201ENSMUST00000184539 609 ntBASIC17.12■□□□□ 0.33
ShdO88834 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.12■□□□□ 0.33
ShdO88834 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShdO88834 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShdO88834 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShdO88834 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ShdO88834 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ShdO88834 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShdO88834 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.12■□□□□ 0.33
ShdO88834 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ShdO88834 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShdO88834 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ShdO88834 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ShdO88834 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.11■□□□□ 0.33
ShdO88834 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.11■□□□□ 0.33
ShdO88834 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShdO88834 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShdO88834 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ShdO88834 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShdO88834 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShdO88834 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShdO88834 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ShdO88834 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ShdO88834 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.11■□□□□ 0.33
ShdO88834 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.11■□□□□ 0.33
ShdO88834 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.11■□□□□ 0.33
ShdO88834 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.11■□□□□ 0.33
ShdO88834 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.11■□□□□ 0.33
ShdO88834 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShdO88834 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShdO88834 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShdO88834 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.11■□□□□ 0.33
ShdO88834 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShdO88834 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShdO88834 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShdO88834 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShdO88834 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShdO88834 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
ShdO88834 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShdO88834 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ShdO88834 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShdO88834 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.1■□□□□ 0.33
ShdO88834 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShdO88834 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShdO88834 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShdO88834 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.1■□□□□ 0.33
ShdO88834 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.1■□□□□ 0.33
ShdO88834 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShdO88834 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShdO88834 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShdO88834 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ShdO88834 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShdO88834 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.1■□□□□ 0.33
ShdO88834 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShdO88834 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms