Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a20bO88575 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a20bO88575 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a20bO88575 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a20bO88575 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
Slc6a20bO88575 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a20bO88575 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a20bO88575 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a20bO88575 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a20bO88575 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a20bO88575 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a20bO88575 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a20bO88575 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Slc6a20bO88575 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc6a20bO88575 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Slc6a20bO88575 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc6a20bO88575 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc6a20bO88575 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a20bO88575 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a20bO88575 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a20bO88575 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a20bO88575 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.26■□□□□ 0.51
Slc6a20bO88575 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Slc6a20bO88575 Gm15173-201ENSMUST00000122049 433 ntBASIC18.26■□□□□ 0.51
Slc6a20bO88575 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.26■□□□□ 0.51
Slc6a20bO88575 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.26■□□□□ 0.51
Slc6a20bO88575 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Slc6a20bO88575 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.26■□□□□ 0.51
Slc6a20bO88575 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.26■□□□□ 0.51
Slc6a20bO88575 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a20bO88575 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a20bO88575 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a20bO88575 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a20bO88575 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Gm14822-201ENSMUST00000122247 291 ntBASIC18.25■□□□□ 0.51
Slc6a20bO88575 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Gm4535-201ENSMUST00000182274 558 ntBASIC18.25■□□□□ 0.51
Slc6a20bO88575 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Gm7506-201ENSMUST00000207758 815 ntBASIC18.25■□□□□ 0.51
Slc6a20bO88575 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Gm10355-201ENSMUST00000097146 517 ntBASIC18.25■□□□□ 0.51
Slc6a20bO88575 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.25■□□□□ 0.51
Slc6a20bO88575 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a20bO88575 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a20bO88575 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a20bO88575 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
Slc6a20bO88575 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.24■□□□□ 0.51
Slc6a20bO88575 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a20bO88575 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a20bO88575 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Slc6a20bO88575 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.24■□□□□ 0.51
Slc6a20bO88575 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a20bO88575 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.24■□□□□ 0.51
Slc6a20bO88575 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a20bO88575 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a20bO88575 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a20bO88575 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a20bO88575 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a20bO88575 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a20bO88575 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a20bO88575 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a20bO88575 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a20bO88575 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a20bO88575 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Slc6a20bO88575 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a20bO88575 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a20bO88575 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a20bO88575 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.23■□□□□ 0.51
Slc6a20bO88575 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a20bO88575 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a20bO88575 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Slc6a20bO88575 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a20bO88575 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a20bO88575 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Slc6a20bO88575 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.23■□□□□ 0.51
Slc6a20bO88575 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a20bO88575 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
Slc6a20bO88575 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.23■□□□□ 0.51
Slc6a20bO88575 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a20bO88575 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Slc6a20bO88575 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a20bO88575 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
Slc6a20bO88575 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms