Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ubr1O70481 Gm10355-201ENSMUST00000097146 517 ntBASIC21.72■■□□□ 1.07
Ubr1O70481 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ubr1O70481 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ubr1O70481 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Ubr1O70481 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr1O70481 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Ubr1O70481 Gm8097-201ENSMUST00000117903 829 ntBASIC21.71■■□□□ 1.07
Ubr1O70481 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr1O70481 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr1O70481 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC21.71■■□□□ 1.07
Ubr1O70481 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr1O70481 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr1O70481 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr1O70481 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr1O70481 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr1O70481 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr1O70481 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.71■■□□□ 1.07
Ubr1O70481 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr1O70481 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr1O70481 AC132104.2-201ENSMUST00000215011 266 ntBASIC21.71■■□□□ 1.07
Ubr1O70481 AC127349.1-201ENSMUST00000224590 266 ntBASIC21.71■■□□□ 1.07
Ubr1O70481 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr1O70481 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ubr1O70481 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ubr1O70481 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ubr1O70481 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ubr1O70481 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr1O70481 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr1O70481 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Ubr1O70481 Gm1401-201ENSMUST00000122048 772 ntBASIC21.7■■□□□ 1.06
Ubr1O70481 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC21.7■■□□□ 1.06
Ubr1O70481 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
Ubr1O70481 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC21.7■■□□□ 1.06
Ubr1O70481 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr1O70481 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr1O70481 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr1O70481 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC21.7■■□□□ 1.06
Ubr1O70481 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr1O70481 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Ubr1O70481 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr1O70481 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr1O70481 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr1O70481 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr1O70481 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr1O70481 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr1O70481 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr1O70481 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr1O70481 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ubr1O70481 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ubr1O70481 Gm6858-201ENSMUST00000208582 1468 ntBASIC21.69■■□□□ 1.06
Ubr1O70481 Gm11779-201ENSMUST00000118541 368 ntBASIC21.69■■□□□ 1.06
Ubr1O70481 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC21.69■■□□□ 1.06
Ubr1O70481 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC21.69■■□□□ 1.06
Ubr1O70481 Rbfox2-207ENSMUST00000227533 1041 ntBASIC21.69■■□□□ 1.06
Ubr1O70481 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ubr1O70481 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ubr1O70481 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC21.69■■□□□ 1.06
Ubr1O70481 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ubr1O70481 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ubr1O70481 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ubr1O70481 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC21.69■■□□□ 1.06
Ubr1O70481 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
Ubr1O70481 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ubr1O70481 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ubr1O70481 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ubr1O70481 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ubr1O70481 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr1O70481 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr1O70481 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr1O70481 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr1O70481 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr1O70481 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr1O70481 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr1O70481 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC21.68■■□□□ 1.06
Ubr1O70481 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
Ubr1O70481 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr1O70481 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr1O70481 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC21.67■■□□□ 1.06
Ubr1O70481 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ubr1O70481 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ubr1O70481 Gm13036-201ENSMUST00000117799 748 ntBASIC21.67■■□□□ 1.06
Ubr1O70481 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ubr1O70481 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ubr1O70481 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ubr1O70481 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC21.67■■□□□ 1.06
Ubr1O70481 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ubr1O70481 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ubr1O70481 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Ubr1O70481 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr1O70481 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr1O70481 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr1O70481 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr1O70481 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr1O70481 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr1O70481 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr1O70481 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr1O70481 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr1O70481 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr1O70481 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms