Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim3O70209 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim3O70209 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim3O70209 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim3O70209 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim3O70209 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim3O70209 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim3O70209 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.23■□□□□ 0.03
Pdlim3O70209 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.23■□□□□ 0.03
Pdlim3O70209 Gm11249-201ENSMUST00000117071 859 ntBASIC15.23■□□□□ 0.03
Pdlim3O70209 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.23■□□□□ 0.03
Pdlim3O70209 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.23■□□□□ 0.03
Pdlim3O70209 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.23■□□□□ 0.03
Pdlim3O70209 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim3O70209 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim3O70209 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pdlim3O70209 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.23■□□□□ 0.03
Pdlim3O70209 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim3O70209 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim3O70209 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.23■□□□□ 0.03
Pdlim3O70209 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim3O70209 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim3O70209 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pdlim3O70209 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
Pdlim3O70209 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pdlim3O70209 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim3O70209 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pdlim3O70209 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim3O70209 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim3O70209 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim3O70209 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.22■□□□□ 0.03
Pdlim3O70209 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim3O70209 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim3O70209 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim3O70209 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pdlim3O70209 Gm12896-201ENSMUST00000118430 226 ntBASIC15.22■□□□□ 0.03
Pdlim3O70209 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim3O70209 Gm27405-201ENSMUST00000184201 112 ntBASIC15.22■□□□□ 0.03
Pdlim3O70209 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.22■□□□□ 0.03
Pdlim3O70209 Gm18025-201ENSMUST00000221733 862 ntBASIC15.22■□□□□ 0.03
Pdlim3O70209 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim3O70209 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.22■□□□□ 0.03
Pdlim3O70209 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Pdlim3O70209 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim3O70209 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim3O70209 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim3O70209 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim3O70209 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pdlim3O70209 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim3O70209 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.22■□□□□ 0.03
Pdlim3O70209 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim3O70209 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim3O70209 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim3O70209 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim3O70209 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim3O70209 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim3O70209 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim3O70209 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.21■□□□□ 0.03
Pdlim3O70209 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Pdlim3O70209 Gm13158-201ENSMUST00000122007 736 ntBASIC15.21■□□□□ 0.03
Pdlim3O70209 Gm42545-201ENSMUST00000202755 922 ntBASIC15.21■□□□□ 0.03
Pdlim3O70209 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pdlim3O70209 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim3O70209 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pdlim3O70209 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim3O70209 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim3O70209 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Pdlim3O70209 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim3O70209 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim3O70209 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pdlim3O70209 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pdlim3O70209 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Pdlim3O70209 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pdlim3O70209 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pdlim3O70209 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim3O70209 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim3O70209 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim3O70209 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim3O70209 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim3O70209 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim3O70209 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim3O70209 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Pdlim3O70209 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pdlim3O70209 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.2■□□□□ 0.02
Pdlim3O70209 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim3O70209 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Pdlim3O70209 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim3O70209 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pdlim3O70209 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim3O70209 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim3O70209 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim3O70209 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.2■□□□□ 0.02
Pdlim3O70209 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim3O70209 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.2■□□□□ 0.02
Pdlim3O70209 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim3O70209 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim3O70209 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim3O70209 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim3O70209 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pdlim3O70209 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms