Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp8O70138 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp8O70138 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Mmp8O70138 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp8O70138 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp8O70138 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.45■□□□□ 0.87
Mmp8O70138 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Mmp8O70138 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp8O70138 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Mmp8O70138 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp8O70138 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp8O70138 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp8O70138 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.45■□□□□ 0.86
Mmp8O70138 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp8O70138 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp8O70138 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp8O70138 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp8O70138 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp8O70138 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp8O70138 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp8O70138 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.45■□□□□ 0.86
Mmp8O70138 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Mmp8O70138 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp8O70138 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp8O70138 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp8O70138 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp8O70138 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Mmp8O70138 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Mmp8O70138 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Mmp8O70138 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp8O70138 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp8O70138 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Mmp8O70138 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.44■□□□□ 0.86
Mmp8O70138 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.44■□□□□ 0.86
Mmp8O70138 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Mmp8O70138 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp8O70138 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp8O70138 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Mmp8O70138 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Mmp8O70138 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp8O70138 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Mmp8O70138 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp8O70138 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp8O70138 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.43■□□□□ 0.86
Mmp8O70138 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp8O70138 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp8O70138 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Mmp8O70138 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp8O70138 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.43■□□□□ 0.86
Mmp8O70138 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp8O70138 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp8O70138 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Mmp8O70138 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp8O70138 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp8O70138 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp8O70138 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp8O70138 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Mmp8O70138 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp8O70138 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Mmp8O70138 Gm29707-201ENSMUST00000196325 491 ntBASIC20.42■□□□□ 0.86
Mmp8O70138 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp8O70138 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.42■□□□□ 0.86
Mmp8O70138 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp8O70138 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp8O70138 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp8O70138 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.42■□□□□ 0.86
Mmp8O70138 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp8O70138 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp8O70138 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp8O70138 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp8O70138 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Mmp8O70138 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp8O70138 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.41■□□□□ 0.86
Mmp8O70138 Gm23634-201ENSMUST00000175071 91 ntBASIC20.41■□□□□ 0.86
Mmp8O70138 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.41■□□□□ 0.86
Mmp8O70138 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.41■□□□□ 0.86
Mmp8O70138 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.41■□□□□ 0.86
Mmp8O70138 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.41■□□□□ 0.86
Mmp8O70138 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.41■□□□□ 0.86
Mmp8O70138 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp8O70138 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp8O70138 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp8O70138 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp8O70138 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.41■□□□□ 0.86
Mmp8O70138 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp8O70138 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Mmp8O70138 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp8O70138 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp8O70138 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp8O70138 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp8O70138 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp8O70138 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp8O70138 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp8O70138 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp8O70138 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp8O70138 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Mmp8O70138 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp8O70138 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp8O70138 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp8O70138 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms