Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rdh5O55240 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rdh5O55240 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rdh5O55240 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Rdh5O55240 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh5O55240 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh5O55240 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh5O55240 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh5O55240 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh5O55240 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh5O55240 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh5O55240 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.89■□□□□ 0.13
Rdh5O55240 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.89■□□□□ 0.13
Rdh5O55240 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Rdh5O55240 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh5O55240 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rdh5O55240 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh5O55240 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh5O55240 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh5O55240 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh5O55240 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh5O55240 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rdh5O55240 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rdh5O55240 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rdh5O55240 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rdh5O55240 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Rdh5O55240 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rdh5O55240 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rdh5O55240 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rdh5O55240 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rdh5O55240 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Rdh5O55240 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rdh5O55240 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rdh5O55240 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.88■□□□□ 0.13
Rdh5O55240 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rdh5O55240 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rdh5O55240 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rdh5O55240 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rdh5O55240 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rdh5O55240 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rdh5O55240 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rdh5O55240 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rdh5O55240 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rdh5O55240 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.87■□□□□ 0.13
Rdh5O55240 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.87■□□□□ 0.13
Rdh5O55240 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rdh5O55240 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rdh5O55240 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rdh5O55240 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rdh5O55240 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rdh5O55240 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rdh5O55240 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Rdh5O55240 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rdh5O55240 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.86■□□□□ 0.13
Rdh5O55240 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.86■□□□□ 0.13
Rdh5O55240 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.86■□□□□ 0.13
Rdh5O55240 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Rdh5O55240 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rdh5O55240 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rdh5O55240 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Rdh5O55240 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rdh5O55240 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Rdh5O55240 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rdh5O55240 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.85■□□□□ 0.13
Rdh5O55240 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Rdh5O55240 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Rdh5O55240 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rdh5O55240 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.85■□□□□ 0.13
Rdh5O55240 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Rdh5O55240 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms