Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pja1O55176 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pja1O55176 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.72■□□□□ 0.43
Pja1O55176 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pja1O55176 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.72■□□□□ 0.43
Pja1O55176 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pja1O55176 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pja1O55176 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pja1O55176 Gm5643-201ENSMUST00000117081 966 ntBASIC17.72■□□□□ 0.43
Pja1O55176 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pja1O55176 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pja1O55176 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pja1O55176 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pja1O55176 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Pja1O55176 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pja1O55176 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pja1O55176 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pja1O55176 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pja1O55176 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pja1O55176 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pja1O55176 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pja1O55176 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pja1O55176 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.71■□□□□ 0.43
Pja1O55176 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pja1O55176 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pja1O55176 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Pja1O55176 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pja1O55176 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Pja1O55176 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.71■□□□□ 0.43
Pja1O55176 Gm10698-201ENSMUST00000182663 604 ntBASIC17.71■□□□□ 0.43
Pja1O55176 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pja1O55176 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pja1O55176 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pja1O55176 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pja1O55176 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.71■□□□□ 0.43
Pja1O55176 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pja1O55176 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pja1O55176 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.7■□□□□ 0.42
Pja1O55176 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.7■□□□□ 0.42
Pja1O55176 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pja1O55176 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.7■□□□□ 0.42
Pja1O55176 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pja1O55176 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pja1O55176 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pja1O55176 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pja1O55176 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pja1O55176 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pja1O55176 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pja1O55176 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pja1O55176 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.69■□□□□ 0.42
Pja1O55176 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pja1O55176 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.69■□□□□ 0.42
Pja1O55176 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.69■□□□□ 0.42
Pja1O55176 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pja1O55176 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.69■□□□□ 0.42
Pja1O55176 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.69■□□□□ 0.42
Pja1O55176 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pja1O55176 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pja1O55176 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pja1O55176 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pja1O55176 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pja1O55176 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pja1O55176 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pja1O55176 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pja1O55176 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Pja1O55176 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pja1O55176 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pja1O55176 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pja1O55176 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pja1O55176 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pja1O55176 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pja1O55176 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pja1O55176 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.68■□□□□ 0.42
Pja1O55176 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pja1O55176 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pja1O55176 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pja1O55176 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.68■□□□□ 0.42
Pja1O55176 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pja1O55176 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pja1O55176 Il3ra-202ENSMUST00000223589 738 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms