Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rnf13O54965 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rnf13O54965 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf13O54965 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf13O54965 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rnf13O54965 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rnf13O54965 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf13O54965 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.23■□□□□ 0.03
Rnf13O54965 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf13O54965 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf13O54965 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.23■□□□□ 0.03
Rnf13O54965 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Rnf13O54965 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.23■□□□□ 0.03
Rnf13O54965 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf13O54965 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf13O54965 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf13O54965 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf13O54965 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf13O54965 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf13O54965 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf13O54965 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rnf13O54965 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Gm11249-201ENSMUST00000117071 859 ntBASIC15.22■□□□□ 0.03
Rnf13O54965 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rnf13O54965 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf13O54965 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf13O54965 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf13O54965 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf13O54965 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rnf13O54965 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf13O54965 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf13O54965 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf13O54965 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf13O54965 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Rnf13O54965 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rnf13O54965 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rnf13O54965 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf13O54965 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf13O54965 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.21■□□□□ 0.03
Rnf13O54965 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf13O54965 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf13O54965 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf13O54965 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf13O54965 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Rnf13O54965 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf13O54965 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf13O54965 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf13O54965 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf13O54965 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf13O54965 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Rnf13O54965 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.2■□□□□ 0.02
Rnf13O54965 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.2■□□□□ 0.02
Rnf13O54965 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf13O54965 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rnf13O54965 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf13O54965 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf13O54965 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf13O54965 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf13O54965 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf13O54965 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf13O54965 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.2■□□□□ 0.02
Rnf13O54965 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.2■□□□□ 0.02
Rnf13O54965 Gm4974-201ENSMUST00000209974 875 ntBASIC15.2■□□□□ 0.02
Rnf13O54965 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.2■□□□□ 0.02
Rnf13O54965 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf13O54965 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf13O54965 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf13O54965 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.2■□□□□ 0.02
Rnf13O54965 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf13O54965 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf13O54965 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf13O54965 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf13O54965 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms