Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gm11950-201ENSMUST00000121615 838 ntBASIC17.79■□□□□ 0.44
Itgb3O54890 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Itgb3O54890 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.79■□□□□ 0.44
Itgb3O54890 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.79■□□□□ 0.44
Itgb3O54890 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.79■□□□□ 0.44
Itgb3O54890 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Itgb3O54890 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.79■□□□□ 0.44
Itgb3O54890 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Itgb3O54890 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Itgb3O54890 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Itgb3O54890 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.79■□□□□ 0.44
Itgb3O54890 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Itgb3O54890 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Itgb3O54890 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.79■□□□□ 0.44
Itgb3O54890 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Itgb3O54890 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Itgb3O54890 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Itgb3O54890 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Itgb3O54890 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Itgb3O54890 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.78■□□□□ 0.44
Itgb3O54890 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.78■□□□□ 0.44
Itgb3O54890 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.78■□□□□ 0.44
Itgb3O54890 Gm7284-201ENSMUST00000131667 944 ntBASIC17.78■□□□□ 0.44
Itgb3O54890 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Itgb3O54890 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Itgb3O54890 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Itgb3O54890 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Itgb3O54890 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Itgb3O54890 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Itgb3O54890 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Itgb3O54890 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Itgb3O54890 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Itgb3O54890 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Itgb3O54890 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Itgb3O54890 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Itgb3O54890 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Itgb3O54890 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Itgb3O54890 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Itgb3O54890 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.77■□□□□ 0.44
Itgb3O54890 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.77■□□□□ 0.44
Itgb3O54890 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Itgb3O54890 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Itgb3O54890 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Itgb3O54890 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.77■□□□□ 0.44
Itgb3O54890 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Itgb3O54890 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.76■□□□□ 0.43
Itgb3O54890 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Itgb3O54890 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Itgb3O54890 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Itgb3O54890 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Itgb3O54890 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Itgb3O54890 Gm14859-201ENSMUST00000117752 357 ntBASIC17.76■□□□□ 0.43
Itgb3O54890 Gm44450-201ENSMUST00000199528 114 ntBASIC17.76■□□□□ 0.43
Itgb3O54890 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Itgb3O54890 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Itgb3O54890 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Itgb3O54890 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Itgb3O54890 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Itgb3O54890 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Itgb3O54890 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Itgb3O54890 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Itgb3O54890 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Itgb3O54890 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Itgb3O54890 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Itgb3O54890 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Itgb3O54890 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Itgb3O54890 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Itgb3O54890 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Itgb3O54890 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Itgb3O54890 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Itgb3O54890 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Itgb3O54890 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Itgb3O54890 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Itgb3O54890 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Itgb3O54890 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Itgb3O54890 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Itgb3O54890 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Itgb3O54890 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Itgb3O54890 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Itgb3O54890 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Itgb3O54890 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.74■□□□□ 0.43
Itgb3O54890 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Itgb3O54890 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Itgb3O54890 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Itgb3O54890 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Itgb3O54890 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.74■□□□□ 0.43
Itgb3O54890 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.74■□□□□ 0.43
Itgb3O54890 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Itgb3O54890 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Itgb3O54890 Gm27704-201ENSMUST00000185094 107 ntBASIC17.74■□□□□ 0.43
Itgb3O54890 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Itgb3O54890 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Itgb3O54890 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Itgb3O54890 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Itgb3O54890 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Itgb3O54890 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Itgb3O54890 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Itgb3O54890 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Itgb3O54890 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Itgb3O54890 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms