Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ChkaO54804 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ChkaO54804 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ChkaO54804 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ChkaO54804 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
ChkaO54804 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ChkaO54804 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ChkaO54804 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ChkaO54804 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ChkaO54804 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ChkaO54804 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ChkaO54804 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ChkaO54804 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ChkaO54804 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.93■□□□□ 0.3
ChkaO54804 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.93■□□□□ 0.3
ChkaO54804 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.93■□□□□ 0.3
ChkaO54804 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.93■□□□□ 0.3
ChkaO54804 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ChkaO54804 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
ChkaO54804 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ChkaO54804 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ChkaO54804 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ChkaO54804 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ChkaO54804 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.93■□□□□ 0.3
ChkaO54804 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.93■□□□□ 0.3
ChkaO54804 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ChkaO54804 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ChkaO54804 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ChkaO54804 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ChkaO54804 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ChkaO54804 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ChkaO54804 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ChkaO54804 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ChkaO54804 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ChkaO54804 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ChkaO54804 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ChkaO54804 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ChkaO54804 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ChkaO54804 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ChkaO54804 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ChkaO54804 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ChkaO54804 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
ChkaO54804 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.92■□□□□ 0.3
ChkaO54804 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.92■□□□□ 0.3
ChkaO54804 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ChkaO54804 Gm22240-201ENSMUST00000175225 82 ntBASIC16.92■□□□□ 0.3
ChkaO54804 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
ChkaO54804 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.92■□□□□ 0.3
ChkaO54804 Gm7791-201ENSMUST00000219066 539 ntBASIC16.92■□□□□ 0.3
ChkaO54804 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ChkaO54804 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ChkaO54804 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ChkaO54804 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ChkaO54804 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ChkaO54804 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ChkaO54804 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ChkaO54804 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ChkaO54804 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ChkaO54804 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ChkaO54804 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
ChkaO54804 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ChkaO54804 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.91■□□□□ 0.3
ChkaO54804 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.91■□□□□ 0.3
ChkaO54804 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ChkaO54804 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ChkaO54804 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ChkaO54804 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ChkaO54804 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ChkaO54804 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ChkaO54804 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ChkaO54804 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ChkaO54804 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ChkaO54804 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ChkaO54804 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ChkaO54804 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ChkaO54804 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ChkaO54804 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ChkaO54804 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ChkaO54804 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ChkaO54804 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ChkaO54804 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ChkaO54804 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ChkaO54804 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ChkaO54804 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ChkaO54804 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ChkaO54804 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ChkaO54804 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ChkaO54804 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.9■□□□□ 0.3
ChkaO54804 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ChkaO54804 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ChkaO54804 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ChkaO54804 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ChkaO54804 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ChkaO54804 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ChkaO54804 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.9■□□□□ 0.3
ChkaO54804 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ChkaO54804 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ChkaO54804 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ChkaO54804 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
ChkaO54804 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms