Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Matn3O35701 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Matn3O35701 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Matn3O35701 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Matn3O35701 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Matn3O35701 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.3■□□□□ 0.04
Matn3O35701 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Matn3O35701 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Matn3O35701 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Matn3O35701 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.29■□□□□ 0.04
Matn3O35701 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Matn3O35701 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Matn3O35701 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Matn3O35701 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Matn3O35701 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Matn3O35701 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Matn3O35701 Gm13401-201ENSMUST00000117074 291 ntBASIC15.29■□□□□ 0.04
Matn3O35701 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Matn3O35701 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.29■□□□□ 0.04
Matn3O35701 Gm10602-201ENSMUST00000098239 609 ntBASIC15.29■□□□□ 0.04
Matn3O35701 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Matn3O35701 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Matn3O35701 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Matn3O35701 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Matn3O35701 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Matn3O35701 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Matn3O35701 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Matn3O35701 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.28■□□□□ 0.04
Matn3O35701 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Matn3O35701 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Matn3O35701 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Matn3O35701 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Matn3O35701 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Matn3O35701 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Matn3O35701 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.28■□□□□ 0.04
Matn3O35701 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Matn3O35701 Gm38285-201ENSMUST00000192928 922 ntBASIC15.28■□□□□ 0.04
Matn3O35701 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.28■□□□□ 0.04
Matn3O35701 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Matn3O35701 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Matn3O35701 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Matn3O35701 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Matn3O35701 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Matn3O35701 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Matn3O35701 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Matn3O35701 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Matn3O35701 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Matn3O35701 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Matn3O35701 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Matn3O35701 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Matn3O35701 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Matn3O35701 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Matn3O35701 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Matn3O35701 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Matn3O35701 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Matn3O35701 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Matn3O35701 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Matn3O35701 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Matn3O35701 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Matn3O35701 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.27■□□□□ 0.04
Matn3O35701 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Matn3O35701 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Matn3O35701 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Matn3O35701 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Matn3O35701 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Matn3O35701 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Matn3O35701 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Matn3O35701 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Matn3O35701 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Matn3O35701 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Matn3O35701 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Matn3O35701 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Matn3O35701 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Matn3O35701 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.26■□□□□ 0.03
Matn3O35701 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.26■□□□□ 0.03
Matn3O35701 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Matn3O35701 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Matn3O35701 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Matn3O35701 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Matn3O35701 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.26■□□□□ 0.03
Matn3O35701 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Matn3O35701 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Matn3O35701 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Matn3O35701 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Matn3O35701 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Matn3O35701 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Matn3O35701 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Matn3O35701 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Matn3O35701 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Matn3O35701 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Matn3O35701 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Matn3O35701 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Matn3O35701 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Matn3O35701 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.25■□□□□ 0.03
Matn3O35701 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Matn3O35701 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Matn3O35701 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Matn3O35701 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Matn3O35701 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Matn3O35701 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms