Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clk2O35491 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clk2O35491 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clk2O35491 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.23■□□□□ 0.51
Clk2O35491 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clk2O35491 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clk2O35491 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.23■□□□□ 0.51
Clk2O35491 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clk2O35491 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clk2O35491 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clk2O35491 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clk2O35491 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Clk2O35491 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clk2O35491 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Clk2O35491 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clk2O35491 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clk2O35491 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clk2O35491 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clk2O35491 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clk2O35491 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.22■□□□□ 0.51
Clk2O35491 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clk2O35491 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clk2O35491 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clk2O35491 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.22■□□□□ 0.51
Clk2O35491 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clk2O35491 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Clk2O35491 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.22■□□□□ 0.51
Clk2O35491 Gm17971-201ENSMUST00000190239 806 ntBASIC18.22■□□□□ 0.51
Clk2O35491 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.22■□□□□ 0.51
Clk2O35491 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clk2O35491 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clk2O35491 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.22■□□□□ 0.51
Clk2O35491 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clk2O35491 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clk2O35491 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clk2O35491 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clk2O35491 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clk2O35491 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Clk2O35491 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clk2O35491 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clk2O35491 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Clk2O35491 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clk2O35491 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Clk2O35491 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.21■□□□□ 0.51
Clk2O35491 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Clk2O35491 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clk2O35491 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clk2O35491 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Clk2O35491 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clk2O35491 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Clk2O35491 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Clk2O35491 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clk2O35491 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clk2O35491 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.2■□□□□ 0.5
Clk2O35491 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.2■□□□□ 0.5
Clk2O35491 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
Clk2O35491 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clk2O35491 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.2■□□□□ 0.5
Clk2O35491 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Clk2O35491 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Clk2O35491 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clk2O35491 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Clk2O35491 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.2■□□□□ 0.5
Clk2O35491 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clk2O35491 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.2■□□□□ 0.5
Clk2O35491 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clk2O35491 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clk2O35491 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Clk2O35491 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Clk2O35491 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Clk2O35491 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clk2O35491 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clk2O35491 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clk2O35491 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clk2O35491 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clk2O35491 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clk2O35491 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.19■□□□□ 0.5
Clk2O35491 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clk2O35491 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clk2O35491 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clk2O35491 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Clk2O35491 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clk2O35491 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clk2O35491 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Clk2O35491 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clk2O35491 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clk2O35491 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.18■□□□□ 0.5
Clk2O35491 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Clk2O35491 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clk2O35491 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clk2O35491 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clk2O35491 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clk2O35491 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Clk2O35491 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clk2O35491 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clk2O35491 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clk2O35491 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.18■□□□□ 0.5
Clk2O35491 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.18■□□□□ 0.5
Clk2O35491 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Clk2O35491 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms