Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Capn1O35350 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Capn1O35350 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Capn1O35350 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.53■□□□□ 0.08
Capn1O35350 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Capn1O35350 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Capn1O35350 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Capn1O35350 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Capn1O35350 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Capn1O35350 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Capn1O35350 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Capn1O35350 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.53■□□□□ 0.08
Capn1O35350 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Capn1O35350 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Capn1O35350 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Capn1O35350 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Capn1O35350 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Capn1O35350 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Capn1O35350 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Capn1O35350 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Capn1O35350 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Capn1O35350 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Capn1O35350 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Capn1O35350 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Capn1O35350 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Capn1O35350 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Capn1O35350 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Capn1O35350 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Capn1O35350 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Capn1O35350 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.52■□□□□ 0.08
Capn1O35350 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Capn1O35350 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.52■□□□□ 0.08
Capn1O35350 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.52■□□□□ 0.08
Capn1O35350 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Capn1O35350 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Capn1O35350 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Capn1O35350 Mir1668-201ENSMUST00000184114 107 ntBASIC15.52■□□□□ 0.08
Capn1O35350 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.52■□□□□ 0.08
Capn1O35350 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.52■□□□□ 0.08
Capn1O35350 Gm21559-201ENSMUST00000220638 855 ntBASIC15.52■□□□□ 0.08
Capn1O35350 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Capn1O35350 Gm8587-201ENSMUST00000076538 843 ntBASIC15.52■□□□□ 0.08
Capn1O35350 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Capn1O35350 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Capn1O35350 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Capn1O35350 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Capn1O35350 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Capn1O35350 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Capn1O35350 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Capn1O35350 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.51■□□□□ 0.07
Capn1O35350 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Capn1O35350 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Capn1O35350 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Capn1O35350 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Capn1O35350 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Capn1O35350 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Capn1O35350 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Capn1O35350 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Capn1O35350 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.51■□□□□ 0.07
Capn1O35350 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.51■□□□□ 0.07
Capn1O35350 Gm25016-201ENSMUST00000158399 131 ntBASIC15.51■□□□□ 0.07
Capn1O35350 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Capn1O35350 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Capn1O35350 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Capn1O35350 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Capn1O35350 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Capn1O35350 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Capn1O35350 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Capn1O35350 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Capn1O35350 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Capn1O35350 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Capn1O35350 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.51■□□□□ 0.07
Capn1O35350 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Capn1O35350 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Capn1O35350 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.5■□□□□ 0.07
Capn1O35350 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Capn1O35350 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Capn1O35350 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Capn1O35350 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Capn1O35350 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Capn1O35350 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.5■□□□□ 0.07
Capn1O35350 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.5■□□□□ 0.07
Capn1O35350 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Capn1O35350 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Capn1O35350 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.5■□□□□ 0.07
Capn1O35350 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Capn1O35350 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Capn1O35350 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Capn1O35350 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Capn1O35350 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Capn1O35350 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.5■□□□□ 0.07
Capn1O35350 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Capn1O35350 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Capn1O35350 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Capn1O35350 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Capn1O35350 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Capn1O35350 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Capn1O35350 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Capn1O35350 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Capn1O35350 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms