Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cpsf2O35218 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf2O35218 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf2O35218 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.94■□□□□ 0.46
Cpsf2O35218 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf2O35218 Gm15378-201ENSMUST00000121894 207 ntBASIC17.94■□□□□ 0.46
Cpsf2O35218 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf2O35218 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf2O35218 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf2O35218 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf2O35218 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf2O35218 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf2O35218 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf2O35218 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf2O35218 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
Cpsf2O35218 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.94■□□□□ 0.46
Cpsf2O35218 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf2O35218 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf2O35218 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf2O35218 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf2O35218 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf2O35218 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cpsf2O35218 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf2O35218 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf2O35218 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf2O35218 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf2O35218 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf2O35218 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.93■□□□□ 0.46
Cpsf2O35218 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf2O35218 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.93■□□□□ 0.46
Cpsf2O35218 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf2O35218 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.93■□□□□ 0.46
Cpsf2O35218 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf2O35218 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf2O35218 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cpsf2O35218 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf2O35218 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf2O35218 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Cpsf2O35218 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf2O35218 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf2O35218 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf2O35218 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf2O35218 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf2O35218 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Cpsf2O35218 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf2O35218 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf2O35218 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf2O35218 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf2O35218 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf2O35218 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf2O35218 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Cpsf2O35218 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cpsf2O35218 Gm12085-201ENSMUST00000119263 940 ntBASIC17.92■□□□□ 0.46
Cpsf2O35218 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf2O35218 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.92■□□□□ 0.46
Cpsf2O35218 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.92■□□□□ 0.46
Cpsf2O35218 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cpsf2O35218 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf2O35218 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf2O35218 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf2O35218 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf2O35218 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Cpsf2O35218 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf2O35218 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf2O35218 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf2O35218 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf2O35218 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf2O35218 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf2O35218 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf2O35218 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf2O35218 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf2O35218 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf2O35218 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.91■□□□□ 0.46
Cpsf2O35218 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.91■□□□□ 0.46
Cpsf2O35218 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.91■□□□□ 0.46
Cpsf2O35218 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cpsf2O35218 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf2O35218 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cpsf2O35218 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf2O35218 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf2O35218 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf2O35218 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Cpsf2O35218 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf2O35218 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf2O35218 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf2O35218 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf2O35218 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf2O35218 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf2O35218 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf2O35218 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf2O35218 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf2O35218 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf2O35218 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf2O35218 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf2O35218 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf2O35218 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf2O35218 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cpsf2O35218 Gm10653-202ENSMUST00000139570 835 ntBASIC17.9■□□□□ 0.46
Cpsf2O35218 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.9■□□□□ 0.46
Cpsf2O35218 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms