Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pkd1O08852 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC10.6□□□□□ -0.71
Pkd1O08852 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pkd1O08852 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pkd1O08852 Gm13616-201ENSMUST00000120600 222 ntBASIC10.6□□□□□ -0.71
Pkd1O08852 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC10.6□□□□□ -0.71
Pkd1O08852 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pkd1O08852 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pkd1O08852 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pkd1O08852 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC10.6□□□□□ -0.71
Pkd1O08852 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pkd1O08852 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pkd1O08852 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pkd1O08852 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pkd1O08852 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.6□□□□□ -0.71
Pkd1O08852 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC10.6□□□□□ -0.71
Pkd1O08852 Gm27646-201ENSMUST00000183989 110 ntBASIC10.6□□□□□ -0.71
Pkd1O08852 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.6□□□□□ -0.71
Pkd1O08852 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC10.6□□□□□ -0.71
Pkd1O08852 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pkd1O08852 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pkd1O08852 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pkd1O08852 Gm6627-201ENSMUST00000218299 2386 ntBASIC10.6□□□□□ -0.71
Pkd1O08852 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pkd1O08852 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pkd1O08852 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC10.6□□□□□ -0.71
Pkd1O08852 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pkd1O08852 Gm5953-201ENSMUST00000220644 2616 ntBASIC10.6□□□□□ -0.71
Pkd1O08852 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Pkd1O08852 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pkd1O08852 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pkd1O08852 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pkd1O08852 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Pkd1O08852 Gm23547-201ENSMUST00000158210 271 ntBASIC10.59□□□□□ -0.71
Pkd1O08852 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.59□□□□□ -0.71
Pkd1O08852 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pkd1O08852 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pkd1O08852 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pkd1O08852 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Pkd1O08852 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pkd1O08852 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pkd1O08852 Gm12497-201ENSMUST00000138778 237 ntBASIC10.59□□□□□ -0.71
Pkd1O08852 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pkd1O08852 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Pkd1O08852 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pkd1O08852 AC174742.1-201ENSMUST00000218272 304 ntBASIC10.59□□□□□ -0.71
Pkd1O08852 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pkd1O08852 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pkd1O08852 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Pkd1O08852 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pkd1O08852 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pkd1O08852 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pkd1O08852 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pkd1O08852 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pkd1O08852 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Pkd1O08852 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Pkd1O08852 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pkd1O08852 Gm25406-201ENSMUST00000157599 105 ntBASIC10.58□□□□□ -0.72
Pkd1O08852 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pkd1O08852 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC10.58□□□□□ -0.72
Pkd1O08852 Gm8396-201ENSMUST00000057361 823 ntBASIC10.58□□□□□ -0.72
Pkd1O08852 AC123834.2-201ENSMUST00000224038 2340 ntBASIC10.58□□□□□ -0.72
Pkd1O08852 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pkd1O08852 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pkd1O08852 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pkd1O08852 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Pkd1O08852 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pkd1O08852 AC139382.1-201ENSMUST00000221402 498 ntBASIC10.58□□□□□ -0.72
Pkd1O08852 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pkd1O08852 Gm3928-201ENSMUST00000121141 1307 ntBASIC10.58□□□□□ -0.72
Pkd1O08852 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pkd1O08852 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pkd1O08852 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.58□□□□□ -0.72
Pkd1O08852 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pkd1O08852 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pkd1O08852 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pkd1O08852 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pkd1O08852 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pkd1O08852 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.58□□□□□ -0.72
Pkd1O08852 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pkd1O08852 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pkd1O08852 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pkd1O08852 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.58□□□□□ -0.72
Pkd1O08852 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC10.58□□□□□ -0.72
Pkd1O08852 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pkd1O08852 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Pkd1O08852 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC10.57□□□□□ -0.72
Pkd1O08852 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pkd1O08852 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pkd1O08852 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pkd1O08852 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pkd1O08852 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pkd1O08852 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pkd1O08852 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pkd1O08852 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pkd1O08852 Gm4899-201ENSMUST00000178708 719 ntBASIC10.57□□□□□ -0.72
Pkd1O08852 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pkd1O08852 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pkd1O08852 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pkd1O08852 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms