Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34bJ3QNR8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34bJ3QNR8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34bJ3QNR8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Birc2-201ENSMUST00000054878 378 ntBASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim34bJ3QNR8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trim34bJ3QNR8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim34bJ3QNR8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.47■□□□□ 0.87
Trim34bJ3QNR8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim34bJ3QNR8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trim34bJ3QNR8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Trim34bJ3QNR8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim34bJ3QNR8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
Trim34bJ3QNR8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim34bJ3QNR8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.47■□□□□ 0.87
Trim34bJ3QNR8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.47■□□□□ 0.87
Trim34bJ3QNR8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim34bJ3QNR8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim34bJ3QNR8 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.47■□□□□ 0.87
Trim34bJ3QNR8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim34bJ3QNR8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Trim34bJ3QNR8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim34bJ3QNR8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim34bJ3QNR8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim34bJ3QNR8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim34bJ3QNR8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim34bJ3QNR8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Trim34bJ3QNR8 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.45■□□□□ 0.86
Trim34bJ3QNR8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim34bJ3QNR8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim34bJ3QNR8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.45■□□□□ 0.86
Trim34bJ3QNR8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim34bJ3QNR8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim34bJ3QNR8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim34bJ3QNR8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim34bJ3QNR8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim34bJ3QNR8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim34bJ3QNR8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim34bJ3QNR8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim34bJ3QNR8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim34bJ3QNR8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Trim34bJ3QNR8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim34bJ3QNR8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim34bJ3QNR8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim34bJ3QNR8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.44■□□□□ 0.86
Trim34bJ3QNR8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.44■□□□□ 0.86
Trim34bJ3QNR8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim34bJ3QNR8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim34bJ3QNR8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim34bJ3QNR8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim34bJ3QNR8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim34bJ3QNR8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim34bJ3QNR8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim34bJ3QNR8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Trim34bJ3QNR8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms