Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Ccdc180J3QNE4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Ccdc180J3QNE4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ccdc180J3QNE4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ccdc180J3QNE4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ccdc180J3QNE4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ccdc180J3QNE4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Ccdc180J3QNE4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Ccdc180J3QNE4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Ccdc180J3QNE4 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ccdc180J3QNE4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Ccdc180J3QNE4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC30.47■■■□□ 2.47
Ccdc180J3QNE4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Ccdc180J3QNE4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
Ccdc180J3QNE4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Ccdc180J3QNE4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ccdc180J3QNE4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Gm43808-201ENSMUST00000202534 2065 ntBASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Gm4995-201ENSMUST00000117247 432 ntBASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc180J3QNE4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC30.45■■■□□ 2.47
Ccdc180J3QNE4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Ccdc180J3QNE4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
Ccdc180J3QNE4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC30.45■■■□□ 2.47
Ccdc180J3QNE4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.46
Ccdc180J3QNE4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Ccdc180J3QNE4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC30.45■■■□□ 2.46
Ccdc180J3QNE4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Ccdc180J3QNE4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Ccdc180J3QNE4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Ccdc180J3QNE4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC30.44■■■□□ 2.46
Ccdc180J3QNE4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC30.44■■■□□ 2.46
Ccdc180J3QNE4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ccdc180J3QNE4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC30.44■■■□□ 2.46
Ccdc180J3QNE4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ccdc180J3QNE4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ccdc180J3QNE4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC30.44■■■□□ 2.46
Ccdc180J3QNE4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ccdc180J3QNE4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ccdc180J3QNE4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ccdc180J3QNE4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Ccdc180J3QNE4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Ccdc180J3QNE4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
Ccdc180J3QNE4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Ccdc180J3QNE4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC30.43■■■□□ 2.46
Ccdc180J3QNE4 Gm25925-201ENSMUST00000158314 306 ntBASIC30.42■■■□□ 2.46
Ccdc180J3QNE4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ccdc180J3QNE4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC30.42■■■□□ 2.46
Ccdc180J3QNE4 AC114585.2-202ENSMUST00000228094 426 ntBASIC30.42■■■□□ 2.46
Ccdc180J3QNE4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ccdc180J3QNE4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ccdc180J3QNE4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC30.42■■■□□ 2.46
Ccdc180J3QNE4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ccdc180J3QNE4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ccdc180J3QNE4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ccdc180J3QNE4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ccdc180J3QNE4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ccdc180J3QNE4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
Ccdc180J3QNE4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
Ccdc180J3QNE4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC30.41■■■□□ 2.46
Ccdc180J3QNE4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Ccdc180J3QNE4 Gm25406-201ENSMUST00000157599 105 ntBASIC30.41■■■□□ 2.46
Ccdc180J3QNE4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
Ccdc180J3QNE4 Gm25745-201ENSMUST00000174945 133 ntBASIC30.41■■■□□ 2.46
Ccdc180J3QNE4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ccdc180J3QNE4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Ccdc180J3QNE4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ccdc180J3QNE4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Ccdc180J3QNE4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
Ccdc180J3QNE4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ccdc180J3QNE4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC30.4■■■□□ 2.46
Ccdc180J3QNE4 Gm45203-201ENSMUST00000206384 1831 ntBASIC30.4■■■□□ 2.46
Ccdc180J3QNE4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC30.4■■■□□ 2.46
Ccdc180J3QNE4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC30.4■■■□□ 2.46
Ccdc180J3QNE4 AC084391.1-201ENSMUST00000200651 141 ntBASIC30.4■■■□□ 2.46
Ccdc180J3QNE4 Gm7506-201ENSMUST00000207758 815 ntBASIC30.4■■■□□ 2.46
Ccdc180J3QNE4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC30.4■■■□□ 2.46
Ccdc180J3QNE4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ccdc180J3QNE4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ccdc180J3QNE4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Ccdc180J3QNE4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ccdc180J3QNE4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms