Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.31□□□□□ -0.12
Gm3727J3QM54 Gm38285-201ENSMUST00000192928 922 ntBASIC14.31□□□□□ -0.12
Gm3727J3QM54 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Gm3727J3QM54 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.3□□□□□ -0.12
Gm3727J3QM54 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Gm3727J3QM54 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.3□□□□□ -0.12
Gm3727J3QM54 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3727J3QM54 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Gm3727J3QM54 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3727J3QM54 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Gm3727J3QM54 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Gm3727J3QM54 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3727J3QM54 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3727J3QM54 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3727J3QM54 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3727J3QM54 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Gm3727J3QM54 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3727J3QM54 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Gm3727J3QM54 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Gm13401-201ENSMUST00000117074 291 ntBASIC14.29□□□□□ -0.12
Gm3727J3QM54 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.29□□□□□ -0.12
Gm3727J3QM54 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3727J3QM54 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.29□□□□□ -0.12
Gm3727J3QM54 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms