Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm3139J3QK78 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3139J3QK78 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Gm44450-201ENSMUST00000199528 114 ntBASIC16.73■□□□□ 0.27
Gm3139J3QK78 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.73■□□□□ 0.27
Gm3139J3QK78 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3139J3QK78 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3139J3QK78 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.73■□□□□ 0.27
Gm3139J3QK78 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3139J3QK78 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3139J3QK78 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3139J3QK78 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3139J3QK78 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3139J3QK78 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3139J3QK78 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Gm3139J3QK78 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3139J3QK78 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3139J3QK78 Gm11950-201ENSMUST00000121615 838 ntBASIC16.72■□□□□ 0.27
Gm3139J3QK78 Gm21362-201ENSMUST00000194272 928 ntBASIC16.72■□□□□ 0.27
Gm3139J3QK78 Gm7367-201ENSMUST00000057611 492 ntBASIC16.72■□□□□ 0.27
Gm3139J3QK78 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Gm3139J3QK78 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Gm3139J3QK78 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.72■□□□□ 0.27
Gm3139J3QK78 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.72■□□□□ 0.27
Gm3139J3QK78 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3139J3QK78 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3139J3QK78 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Gm3139J3QK78 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3139J3QK78 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Gm3139J3QK78 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3139J3QK78 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Gm3139J3QK78 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3139J3QK78 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.71■□□□□ 0.27
Gm3139J3QK78 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3139J3QK78 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Gm3139J3QK78 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.71■□□□□ 0.27
Gm3139J3QK78 Gm29707-201ENSMUST00000196325 491 ntBASIC16.71■□□□□ 0.27
Gm3139J3QK78 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3139J3QK78 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3139J3QK78 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3139J3QK78 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3139J3QK78 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3139J3QK78 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Gm3139J3QK78 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3139J3QK78 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3139J3QK78 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Gm3139J3QK78 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Gm3139J3QK78 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3139J3QK78 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.7■□□□□ 0.26
Gm3139J3QK78 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3139J3QK78 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3139J3QK78 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3139J3QK78 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3139J3QK78 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3139J3QK78 Gm14859-201ENSMUST00000117752 357 ntBASIC16.7■□□□□ 0.26
Gm3139J3QK78 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.7■□□□□ 0.26
Gm3139J3QK78 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.7■□□□□ 0.26
Gm3139J3QK78 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3139J3QK78 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Gm3139J3QK78 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3139J3QK78 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3139J3QK78 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3139J3QK78 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Gm3139J3QK78 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3139J3QK78 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3139J3QK78 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3139J3QK78 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3139J3QK78 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3139J3QK78 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3139J3QK78 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3139J3QK78 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3139J3QK78 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3139J3QK78 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3139J3QK78 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3139J3QK78 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.69■□□□□ 0.26
Gm3139J3QK78 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Gm3139J3QK78 Gm18421-201ENSMUST00000204122 625 ntBASIC16.69■□□□□ 0.26
Gm3139J3QK78 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3139J3QK78 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3139J3QK78 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms