Protein–RNA interactions for Protein: F6XDR3

Gm10542, Predicted gene 10542, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10542F6XDR3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Gm10654-201ENSMUST00000098653 1633 ntBASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm10542F6XDR3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Gm26571-201ENSMUST00000181399 666 ntBASIC11.69□□□□□ -0.54
Gm10542F6XDR3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm10542F6XDR3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Gm42918-201ENSMUST00000199249 1580 ntBASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Gm6576-201ENSMUST00000169678 883 ntBASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Gm42569-201ENSMUST00000200539 472 ntBASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC11.68□□□□□ -0.54
Gm10542F6XDR3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms