Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.22■□□□□ 0.35
Atf6F6VAN0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.22■□□□□ 0.35
Atf6F6VAN0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.21■□□□□ 0.35
Atf6F6VAN0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.21■□□□□ 0.35
Atf6F6VAN0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.21■□□□□ 0.35
Atf6F6VAN0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Gm30025-201ENSMUST00000218555 728 ntBASIC17.21■□□□□ 0.35
Atf6F6VAN0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6F6VAN0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Atf6F6VAN0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Atf6F6VAN0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Atf6F6VAN0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.21■□□□□ 0.34
Atf6F6VAN0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Atf6F6VAN0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.2■□□□□ 0.34
Atf6F6VAN0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.2■□□□□ 0.34
Atf6F6VAN0 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.2■□□□□ 0.34
Atf6F6VAN0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6F6VAN0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Atf6F6VAN0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atf6F6VAN0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.19■□□□□ 0.34
Atf6F6VAN0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atf6F6VAN0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Atf6F6VAN0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atf6F6VAN0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Atf6F6VAN0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atf6F6VAN0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Atf6F6VAN0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atf6F6VAN0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atf6F6VAN0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atf6F6VAN0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atf6F6VAN0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atf6F6VAN0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Atf6F6VAN0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atf6F6VAN0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Atf6F6VAN0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Atf6F6VAN0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.18■□□□□ 0.34
Atf6F6VAN0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atf6F6VAN0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atf6F6VAN0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atf6F6VAN0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atf6F6VAN0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Atf6F6VAN0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atf6F6VAN0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Atf6F6VAN0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atf6F6VAN0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atf6F6VAN0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atf6F6VAN0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms