Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Gm15782-201ENSMUST00000121073 445 ntBASIC9.4□□□□□ -0.9
Herc1E9PZP8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Gm27430-201ENSMUST00000184585 107 ntBASIC9.4□□□□□ -0.9
Herc1E9PZP8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Gm44333-201ENSMUST00000197168 107 ntBASIC9.4□□□□□ -0.9
Herc1E9PZP8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Herc1E9PZP8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC9.4□□□□□ -0.91
Herc1E9PZP8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC9.4□□□□□ -0.91
Herc1E9PZP8 Gm8655-201ENSMUST00000221159 852 ntBASIC9.4□□□□□ -0.91
Herc1E9PZP8 AC159106.1-201ENSMUST00000224421 690 ntBASIC9.4□□□□□ -0.91
Herc1E9PZP8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Herc1E9PZP8 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Herc1E9PZP8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Herc1E9PZP8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Herc1E9PZP8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Herc1E9PZP8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Herc1E9PZP8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Herc1E9PZP8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Gm5253-201ENSMUST00000187104 1025 ntBASIC9.39□□□□□ -0.91
Herc1E9PZP8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Gm7593-201ENSMUST00000187246 644 ntBASIC9.39□□□□□ -0.91
Herc1E9PZP8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Syt7-205ENSMUST00000224135 1557 ntBASIC9.39□□□□□ -0.91
Herc1E9PZP8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Herc1E9PZP8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC9.39□□□□□ -0.91
Herc1E9PZP8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Herc1E9PZP8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Herc1E9PZP8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Herc1E9PZP8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Gm12329-201ENSMUST00000120829 1007 ntBASIC9.38□□□□□ -0.91
Herc1E9PZP8 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC9.38□□□□□ -0.91
Herc1E9PZP8 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Gm23984-201ENSMUST00000157139 203 ntBASIC9.38□□□□□ -0.91
Herc1E9PZP8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC9.38□□□□□ -0.91
Herc1E9PZP8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC9.38□□□□□ -0.91
Herc1E9PZP8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Gm7336-201ENSMUST00000107041 1232 ntBASIC9.38□□□□□ -0.91
Herc1E9PZP8 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Gm10499-201ENSMUST00000174094 934 ntBASIC9.38□□□□□ -0.91
Herc1E9PZP8 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Gm5779-201ENSMUST00000218467 910 ntBASIC9.38□□□□□ -0.91
Herc1E9PZP8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 AC140397.2-201ENSMUST00000224213 834 ntBASIC9.38□□□□□ -0.91
Herc1E9PZP8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms