Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx8D3YU81 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.76■□□□□ 0.43
Rfx8D3YU81 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx8D3YU81 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx8D3YU81 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx8D3YU81 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx8D3YU81 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx8D3YU81 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx8D3YU81 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.76■□□□□ 0.43
Rfx8D3YU81 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx8D3YU81 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx8D3YU81 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.76■□□□□ 0.43
Rfx8D3YU81 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx8D3YU81 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx8D3YU81 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx8D3YU81 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx8D3YU81 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx8D3YU81 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rfx8D3YU81 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx8D3YU81 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx8D3YU81 Mir5130-201ENSMUST00000175160 84 ntBASIC17.75■□□□□ 0.43
Rfx8D3YU81 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.75■□□□□ 0.43
Rfx8D3YU81 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.75■□□□□ 0.43
Rfx8D3YU81 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.75■□□□□ 0.43
Rfx8D3YU81 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx8D3YU81 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx8D3YU81 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx8D3YU81 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.75■□□□□ 0.43
Rfx8D3YU81 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rfx8D3YU81 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx8D3YU81 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rfx8D3YU81 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx8D3YU81 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx8D3YU81 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx8D3YU81 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx8D3YU81 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx8D3YU81 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx8D3YU81 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Rfx8D3YU81 Gm7370-201ENSMUST00000219471 767 ntBASIC17.74■□□□□ 0.43
Rfx8D3YU81 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx8D3YU81 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx8D3YU81 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx8D3YU81 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx8D3YU81 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.74■□□□□ 0.43
Rfx8D3YU81 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rfx8D3YU81 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx8D3YU81 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Rfx8D3YU81 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx8D3YU81 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx8D3YU81 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx8D3YU81 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx8D3YU81 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx8D3YU81 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx8D3YU81 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx8D3YU81 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx8D3YU81 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx8D3YU81 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx8D3YU81 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.73■□□□□ 0.43
Rfx8D3YU81 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx8D3YU81 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx8D3YU81 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx8D3YU81 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx8D3YU81 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx8D3YU81 Mir7071-201ENSMUST00000184847 69 ntBASIC17.73■□□□□ 0.43
Rfx8D3YU81 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx8D3YU81 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx8D3YU81 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx8D3YU81 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx8D3YU81 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx8D3YU81 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx8D3YU81 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx8D3YU81 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.72■□□□□ 0.43
Rfx8D3YU81 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rfx8D3YU81 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx8D3YU81 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx8D3YU81 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx8D3YU81 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Rfx8D3YU81 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx8D3YU81 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx8D3YU81 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx8D3YU81 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms