Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.25■□□□□ 0.67
Syce3B5KM66 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Syce3B5KM66 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.25■□□□□ 0.67
Syce3B5KM66 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Syce3B5KM66 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syce3B5KM66 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syce3B5KM66 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Syce3B5KM66 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syce3B5KM66 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syce3B5KM66 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.24■□□□□ 0.67
Syce3B5KM66 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syce3B5KM66 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syce3B5KM66 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syce3B5KM66 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syce3B5KM66 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.24■□□□□ 0.67
Syce3B5KM66 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syce3B5KM66 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syce3B5KM66 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syce3B5KM66 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syce3B5KM66 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.24■□□□□ 0.67
Syce3B5KM66 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.24■□□□□ 0.67
Syce3B5KM66 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syce3B5KM66 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syce3B5KM66 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syce3B5KM66 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Syce3B5KM66 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Syce3B5KM66 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syce3B5KM66 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.23■□□□□ 0.67
Syce3B5KM66 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.23■□□□□ 0.67
Syce3B5KM66 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syce3B5KM66 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Syce3B5KM66 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syce3B5KM66 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syce3B5KM66 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Syce3B5KM66 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Syce3B5KM66 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Syce3B5KM66 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Syce3B5KM66 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Syce3B5KM66 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syce3B5KM66 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syce3B5KM66 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syce3B5KM66 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syce3B5KM66 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Syce3B5KM66 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Syce3B5KM66 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.22■□□□□ 0.67
Syce3B5KM66 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syce3B5KM66 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syce3B5KM66 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Syce3B5KM66 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.22■□□□□ 0.67
Syce3B5KM66 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syce3B5KM66 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syce3B5KM66 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syce3B5KM66 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Syce3B5KM66 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Syce3B5KM66 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Syce3B5KM66 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syce3B5KM66 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syce3B5KM66 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syce3B5KM66 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Syce3B5KM66 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Syce3B5KM66 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Syce3B5KM66 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Syce3B5KM66 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Syce3B5KM66 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.21■□□□□ 0.67
Syce3B5KM66 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syce3B5KM66 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syce3B5KM66 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syce3B5KM66 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syce3B5KM66 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Syce3B5KM66 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Syce3B5KM66 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Syce3B5KM66 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syce3B5KM66 Mir6349-201ENSMUST00000184059 97 ntBASIC19.21■□□□□ 0.67
Syce3B5KM66 AV356131-201ENSMUST00000206201 750 ntBASIC19.21■□□□□ 0.67
Syce3B5KM66 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Syce3B5KM66 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syce3B5KM66 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syce3B5KM66 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syce3B5KM66 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syce3B5KM66 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms