Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp42B2RQC2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp42B2RQC2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp42B2RQC2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Usp42B2RQC2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp42B2RQC2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp42B2RQC2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp42B2RQC2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp42B2RQC2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp42B2RQC2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Usp42B2RQC2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp42B2RQC2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.61■□□□□ 0.73
Usp42B2RQC2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp42B2RQC2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp42B2RQC2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp42B2RQC2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp42B2RQC2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp42B2RQC2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.6■□□□□ 0.73
Usp42B2RQC2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.6■□□□□ 0.73
Usp42B2RQC2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp42B2RQC2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp42B2RQC2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp42B2RQC2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp42B2RQC2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp42B2RQC2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Usp42B2RQC2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp42B2RQC2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp42B2RQC2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp42B2RQC2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp42B2RQC2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp42B2RQC2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Gm37722-201ENSMUST00000193757 208 ntBASIC19.59■□□□□ 0.73
Usp42B2RQC2 Gm18421-201ENSMUST00000204122 625 ntBASIC19.59■□□□□ 0.73
Usp42B2RQC2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.59■□□□□ 0.73
Usp42B2RQC2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.59■□□□□ 0.73
Usp42B2RQC2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp42B2RQC2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
Usp42B2RQC2 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.58■□□□□ 0.73
Usp42B2RQC2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Usp42B2RQC2 Gm11355-201ENSMUST00000121120 306 ntBASIC19.58■□□□□ 0.73
Usp42B2RQC2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Usp42B2RQC2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.58■□□□□ 0.73
Usp42B2RQC2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp42B2RQC2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp42B2RQC2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp42B2RQC2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp42B2RQC2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Usp42B2RQC2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp42B2RQC2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp42B2RQC2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.58■□□□□ 0.72
Usp42B2RQC2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.58■□□□□ 0.72
Usp42B2RQC2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp42B2RQC2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp42B2RQC2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp42B2RQC2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp42B2RQC2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Usp42B2RQC2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp42B2RQC2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp42B2RQC2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp42B2RQC2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.57■□□□□ 0.72
Usp42B2RQC2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp42B2RQC2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp42B2RQC2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp42B2RQC2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp42B2RQC2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp42B2RQC2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp42B2RQC2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp42B2RQC2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Usp42B2RQC2 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.57■□□□□ 0.72
Usp42B2RQC2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp42B2RQC2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp42B2RQC2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp42B2RQC2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp42B2RQC2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp42B2RQC2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp42B2RQC2 Gm6659-201ENSMUST00000174752 547 ntBASIC19.56■□□□□ 0.72
Usp42B2RQC2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp42B2RQC2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Usp42B2RQC2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp42B2RQC2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms