Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn7aB1AYL1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn7aB1AYL1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn7aB1AYL1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn7aB1AYL1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn7aB1AYL1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn7aB1AYL1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Scn7aB1AYL1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Scn7aB1AYL1 Gm13418-201ENSMUST00000119097 944 ntBASIC21.63■■□□□ 1.05
Scn7aB1AYL1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC21.63■■□□□ 1.05
Scn7aB1AYL1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC21.63■■□□□ 1.05
Scn7aB1AYL1 Gm6550-201ENSMUST00000187574 993 ntBASIC21.63■■□□□ 1.05
Scn7aB1AYL1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC21.63■■□□□ 1.05
Scn7aB1AYL1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
Scn7aB1AYL1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn7aB1AYL1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn7aB1AYL1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn7aB1AYL1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn7aB1AYL1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Scn7aB1AYL1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn7aB1AYL1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn7aB1AYL1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn7aB1AYL1 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn7aB1AYL1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn7aB1AYL1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scn7aB1AYL1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scn7aB1AYL1 Gm11779-201ENSMUST00000118541 368 ntBASIC21.61■■□□□ 1.05
Scn7aB1AYL1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scn7aB1AYL1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Scn7aB1AYL1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
Scn7aB1AYL1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scn7aB1AYL1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scn7aB1AYL1 Ddx41-204ENSMUST00000224765 2199 ntBASIC21.61■■□□□ 1.05
Scn7aB1AYL1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Scn7aB1AYL1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 AC132104.2-201ENSMUST00000215011 266 ntBASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Gm13036-201ENSMUST00000117799 748 ntBASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn7aB1AYL1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Scn7aB1AYL1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn7aB1AYL1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn7aB1AYL1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Scn7aB1AYL1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Scn7aB1AYL1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn7aB1AYL1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Scn7aB1AYL1 Gm1401-201ENSMUST00000122048 772 ntBASIC21.59■■□□□ 1.05
Scn7aB1AYL1 Gm43073-201ENSMUST00000198200 1189 ntBASIC21.59■■□□□ 1.05
Scn7aB1AYL1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn7aB1AYL1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.59■■□□□ 1.05
Scn7aB1AYL1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn7aB1AYL1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Scn7aB1AYL1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scn7aB1AYL1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scn7aB1AYL1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
Scn7aB1AYL1 Mir6404-201ENSMUST00000183699 94 ntBASIC21.58■■□□□ 1.05
Scn7aB1AYL1 Gm37584-201ENSMUST00000193595 1290 ntBASIC21.58■■□□□ 1.05
Scn7aB1AYL1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Scn7aB1AYL1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Scn7aB1AYL1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Scn7aB1AYL1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
Scn7aB1AYL1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Scn7aB1AYL1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC21.57■■□□□ 1.04
Scn7aB1AYL1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn7aB1AYL1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
Scn7aB1AYL1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn7aB1AYL1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC21.57■■□□□ 1.04
Scn7aB1AYL1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn7aB1AYL1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn7aB1AYL1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn7aB1AYL1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn7aB1AYL1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Scn7aB1AYL1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scn7aB1AYL1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC21.56■■□□□ 1.04
Scn7aB1AYL1 Gm9172-201ENSMUST00000212092 954 ntBASIC21.56■■□□□ 1.04
Scn7aB1AYL1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Scn7aB1AYL1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn7aB1AYL1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms