Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm12887B1AVM1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm12887B1AVM1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm12887B1AVM1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Gm12887B1AVM1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm12887B1AVM1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm12887B1AVM1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm12887B1AVM1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.61□□□□□ -0.23
Gm12887B1AVM1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm12887B1AVM1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gm12887B1AVM1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Gm12887B1AVM1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm12887B1AVM1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Gm12887B1AVM1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm12887B1AVM1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm12887B1AVM1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Gm12887B1AVM1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gm12887B1AVM1 Gm2011-201ENSMUST00000203124 1263 ntBASIC13.6□□□□□ -0.23
Gm12887B1AVM1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.6□□□□□ -0.23
Gm12887B1AVM1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm12887B1AVM1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm12887B1AVM1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm12887B1AVM1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Gm12887B1AVM1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm12887B1AVM1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm12887B1AVM1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.6□□□□□ -0.23
Gm12887B1AVM1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.6□□□□□ -0.23
Gm12887B1AVM1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.6□□□□□ -0.23
Gm12887B1AVM1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms