Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd6A3KFM7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd6A3KFM7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd6A3KFM7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chd6A3KFM7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chd6A3KFM7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chd6A3KFM7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
Chd6A3KFM7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd6A3KFM7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd6A3KFM7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Chd6A3KFM7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.6□□□□□ -0.23
Chd6A3KFM7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Chd6A3KFM7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.6□□□□□ -0.23
Chd6A3KFM7 Gm44719-201ENSMUST00000206404 149 ntBASIC13.6□□□□□ -0.23
Chd6A3KFM7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd6A3KFM7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chd6A3KFM7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd6A3KFM7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chd6A3KFM7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd6A3KFM7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd6A3KFM7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Chd6A3KFM7 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.59□□□□□ -0.23
Chd6A3KFM7 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Chd6A3KFM7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.59□□□□□ -0.23
Chd6A3KFM7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chd6A3KFM7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Chd6A3KFM7 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.59□□□□□ -0.23
Chd6A3KFM7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd6A3KFM7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd6A3KFM7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Chd6A3KFM7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd6A3KFM7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC13.59□□□□□ -0.23
Chd6A3KFM7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chd6A3KFM7 Gm5784-201ENSMUST00000179344 2478 ntBASIC13.59□□□□□ -0.23
Chd6A3KFM7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd6A3KFM7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Chd6A3KFM7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd6A3KFM7 Gm22175-201ENSMUST00000175007 78 ntBASIC13.59□□□□□ -0.23
Chd6A3KFM7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chd6A3KFM7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chd6A3KFM7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chd6A3KFM7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.58□□□□□ -0.24
Chd6A3KFM7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd6A3KFM7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chd6A3KFM7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Chd6A3KFM7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd6A3KFM7 Gm12490-201ENSMUST00000120255 560 ntBASIC13.58□□□□□ -0.24
Chd6A3KFM7 Gm18062-201ENSMUST00000208020 547 ntBASIC13.58□□□□□ -0.24
Chd6A3KFM7 Gm18055-201ENSMUST00000208254 547 ntBASIC13.58□□□□□ -0.24
Chd6A3KFM7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.58□□□□□ -0.24
Chd6A3KFM7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.58□□□□□ -0.24
Chd6A3KFM7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.58□□□□□ -0.24
Chd6A3KFM7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd6A3KFM7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Chd6A3KFM7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chd6A3KFM7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chd6A3KFM7 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chd6A3KFM7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd6A3KFM7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd6A3KFM7 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.57□□□□□ -0.24
Chd6A3KFM7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd6A3KFM7 Mir1895-201ENSMUST00000122615 79 ntBASIC13.57□□□□□ -0.24
Chd6A3KFM7 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chd6A3KFM7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Chd6A3KFM7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Chd6A3KFM7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.57□□□□□ -0.24
Chd6A3KFM7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd6A3KFM7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Chd6A3KFM7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd6A3KFM7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Chd6A3KFM7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd6A3KFM7 Gm17271-201ENSMUST00000165535 355 ntBASIC13.57□□□□□ -0.24
Chd6A3KFM7 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.57□□□□□ -0.24
Chd6A3KFM7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.57□□□□□ -0.24
Chd6A3KFM7 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd6A3KFM7 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Chd6A3KFM7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd6A3KFM7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.57□□□□□ -0.24
Chd6A3KFM7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chd6A3KFM7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chd6A3KFM7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd6A3KFM7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Gm6912-201ENSMUST00000117218 544 ntBASIC13.56□□□□□ -0.24
Chd6A3KFM7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chd6A3KFM7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms