Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ubr4A2AN08 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ubr4A2AN08 Gm27989-201ENSMUST00000184721 107 ntBASIC8.83□□□□□ -1
Ubr4A2AN08 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ubr4A2AN08 Gm6180-201ENSMUST00000065243 498 ntBASIC8.83□□□□□ -1
Ubr4A2AN08 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ubr4A2AN08 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC8.83□□□□□ -1
Ubr4A2AN08 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ubr4A2AN08 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC8.83□□□□□ -1
Ubr4A2AN08 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ubr4A2AN08 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ubr4A2AN08 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ubr4A2AN08 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Gm37466-201ENSMUST00000195692 652 ntBASIC8.82□□□□□ -1
Ubr4A2AN08 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Ubr4A2AN08 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC8.82□□□□□ -1
Ubr4A2AN08 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC8.82□□□□□ -1
Ubr4A2AN08 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ubr4A2AN08 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Ubr4A2AN08 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC8.82□□□□□ -1
Ubr4A2AN08 Gm25745-201ENSMUST00000174945 133 ntBASIC8.82□□□□□ -1
Ubr4A2AN08 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC8.82□□□□□ -1
Ubr4A2AN08 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC8.82□□□□□ -1
Ubr4A2AN08 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ubr4A2AN08 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Ubr4A2AN08 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ubr4A2AN08 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ubr4A2AN08 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ubr4A2AN08 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC8.81□□□□□ -1
Ubr4A2AN08 Gm13597-201ENSMUST00000121239 375 ntBASIC8.81□□□□□ -1
Ubr4A2AN08 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC8.81□□□□□ -1
Ubr4A2AN08 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC8.81□□□□□ -1
Ubr4A2AN08 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ubr4A2AN08 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC8.81□□□□□ -1
Ubr4A2AN08 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ubr4A2AN08 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC8.81□□□□□ -1
Ubr4A2AN08 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Ubr4A2AN08 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ubr4A2AN08 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC8.81□□□□□ -1
Ubr4A2AN08 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC8.81□□□□□ -1
Ubr4A2AN08 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC8.81□□□□□ -1
Ubr4A2AN08 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ubr4A2AN08 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Ubr4A2AN08 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ubr4A2AN08 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Ubr4A2AN08 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ubr4A2AN08 Wdyhv1-203ENSMUST00000226889 394 ntBASIC8.81□□□□□ -1
Ubr4A2AN08 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ubr4A2AN08 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ubr4A2AN08 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ubr4A2AN08 Gm27618-201ENSMUST00000183671 60 ntBASIC8.81□□□□□ -1
Ubr4A2AN08 Gm27646-201ENSMUST00000183989 110 ntBASIC8.81□□□□□ -1
Ubr4A2AN08 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ubr4A2AN08 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Ubr4A2AN08 AC132265.1-201ENSMUST00000219233 1665 ntBASIC8.81□□□□□ -1
Ubr4A2AN08 Gm5837-201ENSMUST00000191844 1369 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ubr4A2AN08 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ubr4A2AN08 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ubr4A2AN08 Mir449b-201ENSMUST00000104833 80 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ubr4A2AN08 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC8.8□□□□□ -1
Ubr4A2AN08 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Ubr4A2AN08 Gm5253-201ENSMUST00000187104 1025 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ubr4A2AN08 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Ubr4A2AN08 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC8.8□□□□□ -1
Ubr4A2AN08 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ubr4A2AN08 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ubr4A2AN08 Grk6-207ENSMUST00000225925 2769 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ubr4A2AN08 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ubr4A2AN08 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ubr4A2AN08 Gm22065-201ENSMUST00000103753 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm22066-201ENSMUST00000103761 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm24932-201ENSMUST00000103763 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm24115-201ENSMUST00000103799 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm22190-201ENSMUST00000103827 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm22191-201ENSMUST00000103831 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm24721-201ENSMUST00000103849 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm28018-201ENSMUST00000103869 110 ntBASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms