Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav12-1A0N8R1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-1A0N8R1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-1A0N8R1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-1A0N8R1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav12-1A0N8R1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Gm12441-201ENSMUST00000121806 588 ntBASIC14□□□□□ -0.17
Trav12-1A0N8R1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Gm27000-201ENSMUST00000182943 842 ntBASIC14□□□□□ -0.17
Trav12-1A0N8R1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Gm9731-201ENSMUST00000209480 747 ntBASIC14□□□□□ -0.17
Trav12-1A0N8R1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-1A0N8R1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-1A0N8R1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms