Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.97□□□□□ -0.17
Lnp1A0A1B0GSK3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.97□□□□□ -0.17
Lnp1A0A1B0GSK3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lnp1A0A1B0GSK3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lnp1A0A1B0GSK3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lnp1A0A1B0GSK3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lnp1A0A1B0GSK3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lnp1A0A1B0GSK3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lnp1A0A1B0GSK3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Lnp1A0A1B0GSK3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lnp1A0A1B0GSK3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lnp1A0A1B0GSK3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lnp1A0A1B0GSK3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lnp1A0A1B0GSK3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lnp1A0A1B0GSK3 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.97□□□□□ -0.17
Lnp1A0A1B0GSK3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lnp1A0A1B0GSK3 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.96□□□□□ -0.17
Lnp1A0A1B0GSK3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lnp1A0A1B0GSK3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Lnp1A0A1B0GSK3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lnp1A0A1B0GSK3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lnp1A0A1B0GSK3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lnp1A0A1B0GSK3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Lnp1A0A1B0GSK3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lnp1A0A1B0GSK3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lnp1A0A1B0GSK3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lnp1A0A1B0GSK3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lnp1A0A1B0GSK3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lnp1A0A1B0GSK3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lnp1A0A1B0GSK3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Lnp1A0A1B0GSK3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lnp1A0A1B0GSK3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.96□□□□□ -0.17
Lnp1A0A1B0GSK3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lnp1A0A1B0GSK3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lnp1A0A1B0GSK3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Lnp1A0A1B0GSK3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lnp1A0A1B0GSK3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lnp1A0A1B0GSK3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lnp1A0A1B0GSK3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Lnp1A0A1B0GSK3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Lnp1A0A1B0GSK3 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.96□□□□□ -0.18
Lnp1A0A1B0GSK3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lnp1A0A1B0GSK3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Lnp1A0A1B0GSK3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lnp1A0A1B0GSK3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Lnp1A0A1B0GSK3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lnp1A0A1B0GSK3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lnp1A0A1B0GSK3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Gm18958-201ENSMUST00000174258 762 ntBASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Gm10252-201ENSMUST00000209541 832 ntBASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Gm30025-201ENSMUST00000218555 728 ntBASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Lnp1A0A1B0GSK3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lnp1A0A1B0GSK3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms