Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Igkv1-88A0A140T8N1 Gm43272-201ENSMUST00000200599 1584 ntBASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Igkv1-88A0A140T8N1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Gm26596-201ENSMUST00000180464 2655 ntBASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv1-88A0A140T8N1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Gm13401-201ENSMUST00000117074 291 ntBASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Mir5133-201ENSMUST00000174955 77 ntBASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv1-88A0A140T8N1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Igkv1-88A0A140T8N1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms