Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tcrg-V3A0A0G2JEW2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.21■□□□□ 0.19
Tcrg-V3A0A0G2JEW2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Tcrg-V3A0A0G2JEW2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tcrg-V3A0A0G2JEW2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tcrg-V3A0A0G2JEW2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tcrg-V3A0A0G2JEW2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tcrg-V3A0A0G2JEW2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Tcrg-V3A0A0G2JEW2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tcrg-V3A0A0G2JEW2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Tcrg-V3A0A0G2JEW2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.2■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.2■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm7284-201ENSMUST00000131667 944 ntBASIC16.2■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.2■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.2■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm14859-201ENSMUST00000117752 357 ntBASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm27704-201ENSMUST00000185094 107 ntBASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm18421-201ENSMUST00000204122 625 ntBASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.18■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.18■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms