Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Gm4968-201ENSMUST00000071458 858 ntBASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Gm2559-201ENSMUST00000201323 363 ntBASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav19A0A0B4J1K4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Gm10849-201ENSMUST00000100397 618 ntBASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Gm13148-201ENSMUST00000118892 745 ntBASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Gm42569-201ENSMUST00000200539 472 ntBASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav19A0A0B4J1K4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav19A0A0B4J1K4 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.54□□□□□ -0.4
Trav19A0A0B4J1K4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav19A0A0B4J1K4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav19A0A0B4J1K4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav19A0A0B4J1K4 Dancr-204ENSMUST00000132389 2347 ntBASIC12.54□□□□□ -0.4
Trav19A0A0B4J1K4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav19A0A0B4J1K4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav19A0A0B4J1K4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav19A0A0B4J1K4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav19A0A0B4J1K4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav19A0A0B4J1K4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav19A0A0B4J1K4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav19A0A0B4J1K4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav19A0A0B4J1K4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav19A0A0B4J1K4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms