Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Gm18959-201ENSMUST00000208954 655 ntBASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Gm7370-201ENSMUST00000219471 767 ntBASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-4A0A0B4J1K2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Gm6433-201ENSMUST00000118634 875 ntBASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Gm16061-201ENSMUST00000122167 857 ntBASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Mir5130-201ENSMUST00000175160 84 ntBASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-4A0A0B4J1K2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav9-4A0A0B4J1K2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gm9987-201ENSMUST00000069768 567 ntBASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-4A0A0B4J1K2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gm13474-201ENSMUST00000122466 815 ntBASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-4A0A0B4J1K2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms