Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav11A0A0B4J1J9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Gm7290-201ENSMUST00000104990 617 ntBASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Gm12918-201ENSMUST00000120234 636 ntBASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Gm15710-201ENSMUST00000121821 636 ntBASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Gm6211-202ENSMUST00000167849 925 ntBASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Gm5075-201ENSMUST00000196916 622 ntBASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav11A0A0B4J1J9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav11A0A0B4J1J9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav11A0A0B4J1J9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav11A0A0B4J1J9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav11A0A0B4J1J9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav11A0A0B4J1J9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav11A0A0B4J1J9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav11A0A0B4J1J9 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.54□□□□□ -0.56
Trav11A0A0B4J1J9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav11A0A0B4J1J9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav11A0A0B4J1J9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav11A0A0B4J1J9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav11A0A0B4J1J9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms