Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.66□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Phf7-203ENSMUST00000226565 1971 ntBASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tcrg-V4A0A0B4J1J8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.65□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tcrg-V4A0A0B4J1J8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms