Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Gm44549-201ENSMUST00000208351 577 ntBASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv20A0A0B4J1H5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trbv20A0A0B4J1H5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trbv20A0A0B4J1H5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trbv20A0A0B4J1H5 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trbv20A0A0B4J1H5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trbv20A0A0B4J1H5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.05■□□□□ 0
Trbv20A0A0B4J1H5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv20A0A0B4J1H5 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv20A0A0B4J1H5 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms