Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.77□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Gm18101-201ENSMUST00000215769 548 ntBASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.76□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Gm27389-201ENSMUST00000183622 195 ntBASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Actl10-202ENSMUST00000226583 1501 ntBASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Gm13836-201ENSMUST00000121159 501 ntBASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Gm22697-201ENSMUST00000175194 63 ntBASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Gm10231-201ENSMUST00000181584 441 ntBASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Gm10175-202ENSMUST00000208752 441 ntBASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ighv1-52A0A0A6YXC3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms