Protein–RNA interactions for Protein: A0A0A6YX19

Ighv6-4, Immunoglobulin heavy variable V6-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-4A0A0A6YX19 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv6-4A0A0A6YX19 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ighv6-4A0A0A6YX19 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 Prob1-201ENSMUST00000097619 3021 ntBASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Ighv6-4A0A0A6YX19 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv6-4A0A0A6YX19 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ighv6-4A0A0A6YX19 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ighv6-4A0A0A6YX19 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv6-4A0A0A6YX19 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv6-4A0A0A6YX19 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv6-4A0A0A6YX19 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms